Top 10 genes with highest correlation to Rv1823/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0012/- | (cc=0.8471) | info on Rv0012/- |
| Rv1825/- | (cc=0.8321) | info on Rv1825/- |
| Rv1824/- | (cc=0.7407) | info on Rv1824/- |
| Rv3586/- | (cc=0.7127) | info on Rv3586/- |
| Rv2203/- | (cc=0.6944) | info on Rv2203/- |
| Rv0483/lprQ | (cc=0.6835) | info on Rv0483/lprQ |
| Rv2091c/- | (cc=0.6767) | info on Rv2091c/- |
| Rv1331/- | (cc=0.6466) | info on Rv1331/- |
| Rv2171/lppM | (cc=0.633) | info on Rv2171/lppM |
| Rv3682/ponA2 | (cc=0.5926) | info on Rv3682/ponA2 |
Correlation of Rv1823/- with Rv3586/-
Normalized LFCs for Rv1823/-:
(description and provenance of datasets)
| Rv1823/- | Rv3586/- | |
| Fe_supp_jason_reseq | 2.807 | 2.344 |
| low_pH_jason_reseq | 1.302 | 1.847 |
| NO_jason_reseq | -1.273 | 0.845 |
| B6_jason_reseq | 0.723 | 1.59 |
| MHCII_jason_reseq | 0.818 | 2.226 |
| Isoniazid02 | -0.074 | -0.687 |
| Rifampicin4 | -2.989 | -0.69 |
| Ethambutol3 | -1.369 | -1.021 |
| Meropenem3 | -0.63 | -1.064 |
| Vancomycin16 | -4.717 | -2.902 |
| Rv2680_day32 | -2.814 | -1.792 |
| H37Rv_KO_MarP | 5.537 | 6.0 |
| hypoxia_3wks | -1.483 | 1.4 |
| hypoxia_6wks | -2.088 | -1.119 |
| glycerol | 0.056 | 1.181 |
| cholesterol | -0.676 | -0.481 |
| AJ | -1.849 | -0.721 |
| Bibs02 | -0.525 | -0.303 |
| Bibs02c | -1.269 | -0.032 |
| BL6 | -2.291 | -3.174 |
| BL6a | -1.637 | -0.637 |
| BXD01 | -2.743 | -2.831 |
| BXD010 | -2.697 | -1.672 |
| BXD011 | -1.517 | -2.203 |
| BXD03 | -2.848 | -3.689 |
| BXD04 | -2.481 | -3.034 |
| BXD05 | -2.465 | -2.44 |
| BXD06 | -2.811 | -3.275 |
| BXD07 | -2.777 | -2.394 |
| BXD08 | -2.668 | -3.16 |
| BXD09 | -2.959 | -3.143 |
| CAST | -2.459 | -1.74 |
| CCcont | 0.021 | -1.531 |
| DS01 | -3.389 | -1.711 |
| DS02 | -3.121 | -1.678 |
| DS04 | -3.009 | -0.583 |
| DS0c | -1.86 | 0.033 |
| GP01 | -1.808 | -0.953 |
| GP02 | -1.669 | -0.962 |
| GP0c | -0.924 | -1.387 |
| NOD | -2.312 | -1.526 |
| NZO | -3.094 | -0.442 |
| PWK | -3.44 | -3.167 |
| H37Rv_KO_CtpC | 0.067 | -1.177 |
| H37Rv_KO_CtpD | 0.035 | -0.806 |
| H37Rv_KO_Rv1272 | -1.166 | -2.981 |
| H37Rv_KO_SugABC | -1.987 | -2.094 |
| H37Rv_KO_MbtN | -0.952 | -0.864 |
| Trans05 | -1.345 | -0.594 |
| macrophage_unactivated | 0.0 | -3.156 |
| IL1 | -0.243 | -1.157 |
| Rapamycin | 0.239 | -2.418 |
| Tcell | -0.554 | -2.16 |
| GMCSF | -0.694 | -2.445 |
| IFNab | -0.795 | -1.826 |
| IFNg | 0.208 | -1.614 |
| IFNg_GMCSF1 | -0.826 | -1.898 |
| Rv1432_day32 | -1.752 | -1.4 |
| Rv1565c_day32 | 1.047 | 0.445 |
| secA2_input | 1.291 | 1.392 |
| delta_Rv3594 | -0.471 | 0.509 |
| delta_Rv3717 | -2.153 | -0.877 |
| delta_Rv3811 | -1.374 | -0.518 |
| delta_Rv0954 | -1.395 | -0.805 |
| PonA1 | -0.643 | 0.194 |
| EccD1_KO | -3.526 | -2.799 |
| EspI_KO | -2.892 | -3.325 |
| PE35_KO | -0.21 | -0.394 |
| PPE68_KO | -1.344 | -1.894 |
| glycerol2 | -1.665 | -1.97 |
| lignocerate | 0.124 | -0.943 |
| oleate | -2.691 | -2.098 |
| phosphatidylcholine | 0.63 | -1.084 |
| acetate | 2.233 | -0.045 |
| glucAc | 1.894 | 0.0 |
| Rv0950ko | 0.6 | 1.746 |
| Rv1096ko | -2.962 | -0.691 |
| Rv3684ko | -0.059 | 1.313 |
| delta_otsA_trehalose | 0.289 | 0.474 |