Top 10 genes with highest correlation to Rv1823/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0012/- | (cc=0.8471) | info on Rv0012/- |
| Rv1825/- | (cc=0.8321) | info on Rv1825/- |
| Rv1824/- | (cc=0.7407) | info on Rv1824/- |
| Rv3586/- | (cc=0.7127) | info on Rv3586/- |
| Rv2203/- | (cc=0.6944) | info on Rv2203/- |
| Rv0483/lprQ | (cc=0.6835) | info on Rv0483/lprQ |
| Rv2091c/- | (cc=0.6767) | info on Rv2091c/- |
| Rv1331/- | (cc=0.6466) | info on Rv1331/- |
| Rv2171/lppM | (cc=0.633) | info on Rv2171/lppM |
| Rv3682/ponA2 | (cc=0.5926) | info on Rv3682/ponA2 |
Correlation of Rv1823/- with Rv1331/-
Normalized LFCs for Rv1823/-:
(description and provenance of datasets)
| Rv1823/- | Rv1331/- | |
| Fe_supp_jason_reseq | 2.807 | 0.655 |
| low_pH_jason_reseq | 1.302 | 3.386 |
| NO_jason_reseq | -1.273 | 0.69 |
| B6_jason_reseq | 0.723 | 1.927 |
| MHCII_jason_reseq | 0.818 | 1.868 |
| Isoniazid02 | -0.074 | -1.368 |
| Rifampicin4 | -2.989 | 0.076 |
| Ethambutol3 | -1.369 | -1.367 |
| Meropenem3 | -0.63 | 0.696 |
| Vancomycin16 | -4.717 | -0.753 |
| Rv2680_day32 | -2.814 | -1.59 |
| H37Rv_KO_MarP | 5.537 | 1.595 |
| hypoxia_3wks | -1.483 | -1.679 |
| hypoxia_6wks | -2.088 | -1.186 |
| glycerol | 0.056 | -0.758 |
| cholesterol | -0.676 | -0.497 |
| AJ | -1.849 | -0.988 |
| Bibs02 | -0.525 | 0.082 |
| Bibs02c | -1.269 | -0.139 |
| BL6 | -2.291 | -0.836 |
| BL6a | -1.637 | -1.567 |
| BXD01 | -2.743 | -1.418 |
| BXD010 | -2.697 | -2.614 |
| BXD011 | -1.517 | -1.32 |
| BXD03 | -2.848 | -2.69 |
| BXD04 | -2.481 | -1.905 |
| BXD05 | -2.465 | -1.214 |
| BXD06 | -2.811 | -1.425 |
| BXD07 | -2.777 | -1.129 |
| BXD08 | -2.668 | 0.117 |
| BXD09 | -2.959 | -1.813 |
| CAST | -2.459 | -1.84 |
| CCcont | 0.021 | -0.459 |
| DS01 | -3.389 | -1.562 |
| DS02 | -3.121 | -1.72 |
| DS04 | -3.009 | -0.728 |
| DS0c | -1.86 | -1.103 |
| GP01 | -1.808 | -1.249 |
| GP02 | -1.669 | -0.686 |
| GP0c | -0.924 | -0.753 |
| NOD | -2.312 | -1.635 |
| NZO | -3.094 | -0.465 |
| PWK | -3.44 | -2.245 |
| H37Rv_KO_CtpC | 0.067 | 0.204 |
| H37Rv_KO_CtpD | 0.035 | 0.061 |
| H37Rv_KO_Rv1272 | -1.166 | -0.054 |
| H37Rv_KO_SugABC | -1.987 | -0.023 |
| H37Rv_KO_MbtN | -0.952 | -0.012 |
| Trans05 | -1.345 | -0.739 |
| macrophage_unactivated | 0.0 | 0.518 |
| IL1 | -0.243 | -0.507 |
| Rapamycin | 0.239 | 0.672 |
| Tcell | -0.554 | 0.714 |
| GMCSF | -0.694 | -0.681 |
| IFNab | -0.795 | 0.184 |
| IFNg | 0.208 | 1.141 |
| IFNg_GMCSF1 | -0.826 | 1.254 |
| Rv1432_day32 | -1.752 | -1.967 |
| Rv1565c_day32 | 1.047 | 1.371 |
| secA2_input | 1.291 | -1.357 |
| delta_Rv3594 | -0.471 | 0.0 |
| delta_Rv3717 | -2.153 | 0.578 |
| delta_Rv3811 | -1.374 | 0.022 |
| delta_Rv0954 | -1.395 | -0.939 |
| PonA1 | -0.643 | 0.126 |
| EccD1_KO | -3.526 | 0.181 |
| EspI_KO | -2.892 | 0.328 |
| PE35_KO | -0.21 | 0.744 |
| PPE68_KO | -1.344 | 1.689 |
| glycerol2 | -1.665 | -0.995 |
| lignocerate | 0.124 | 1.038 |
| oleate | -2.691 | -1.202 |
| phosphatidylcholine | 0.63 | 0.623 |
| acetate | 2.233 | 4.124 |
| glucAc | 1.894 | 3.01 |
| Rv0950ko | 0.6 | 0.736 |
| Rv1096ko | -2.962 | 0.374 |
| Rv3684ko | -0.059 | 0.026 |
| delta_otsA_trehalose | 0.289 | -0.519 |