Top 10 genes with highest correlation to Rv1823/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0012/- | (cc=0.8471) | info on Rv0012/- |
| Rv1825/- | (cc=0.8321) | info on Rv1825/- |
| Rv1824/- | (cc=0.7407) | info on Rv1824/- |
| Rv3586/- | (cc=0.7127) | info on Rv3586/- |
| Rv2203/- | (cc=0.6944) | info on Rv2203/- |
| Rv0483/lprQ | (cc=0.6835) | info on Rv0483/lprQ |
| Rv2091c/- | (cc=0.6767) | info on Rv2091c/- |
| Rv1331/- | (cc=0.6466) | info on Rv1331/- |
| Rv2171/lppM | (cc=0.633) | info on Rv2171/lppM |
| Rv3682/ponA2 | (cc=0.5926) | info on Rv3682/ponA2 |
Correlation of Rv1823/- with Rv1824/-
Normalized LFCs for Rv1823/-:
(description and provenance of datasets)
| Rv1823/- | Rv1824/- | |
| Fe_supp_jason_reseq | 2.807 | 2.671 |
| low_pH_jason_reseq | 1.302 | 1.377 |
| NO_jason_reseq | -1.273 | 0.788 |
| B6_jason_reseq | 0.723 | 0.607 |
| MHCII_jason_reseq | 0.818 | 1.132 |
| Isoniazid02 | -0.074 | -0.274 |
| Rifampicin4 | -2.989 | -2.185 |
| Ethambutol3 | -1.369 | -1.366 |
| Meropenem3 | -0.63 | -1.095 |
| Vancomycin16 | -4.717 | -3.526 |
| Rv2680_day32 | -2.814 | -0.131 |
| H37Rv_KO_MarP | 5.537 | 6.0 |
| hypoxia_3wks | -1.483 | -2.269 |
| hypoxia_6wks | -2.088 | -2.827 |
| glycerol | 0.056 | 0.341 |
| cholesterol | -0.676 | -1.129 |
| AJ | -1.849 | -2.403 |
| Bibs02 | -0.525 | -1.191 |
| Bibs02c | -1.269 | -0.876 |
| BL6 | -2.291 | -1.45 |
| BL6a | -1.637 | -0.96 |
| BXD01 | -2.743 | -2.453 |
| BXD010 | -2.697 | -2.913 |
| BXD011 | -1.517 | -1.859 |
| BXD03 | -2.848 | -2.84 |
| BXD04 | -2.481 | -2.813 |
| BXD05 | -2.465 | -2.723 |
| BXD06 | -2.811 | -2.803 |
| BXD07 | -2.777 | -2.359 |
| BXD08 | -2.668 | -3.158 |
| BXD09 | -2.959 | -2.394 |
| CAST | -2.459 | -3.924 |
| CCcont | 0.021 | 1.168 |
| DS01 | -3.389 | -2.897 |
| DS02 | -3.121 | -2.521 |
| DS04 | -3.009 | -0.94 |
| DS0c | -1.86 | -0.247 |
| GP01 | -1.808 | -2.073 |
| GP02 | -1.669 | -1.976 |
| GP0c | -0.924 | -2.84 |
| NOD | -2.312 | -3.279 |
| NZO | -3.094 | -2.744 |
| PWK | -3.44 | -3.969 |
| H37Rv_KO_CtpC | 0.067 | -1.026 |
| H37Rv_KO_CtpD | 0.035 | -1.35 |
| H37Rv_KO_Rv1272 | -1.166 | 0.225 |
| H37Rv_KO_SugABC | -1.987 | -2.163 |
| H37Rv_KO_MbtN | -0.952 | -1.756 |
| Trans05 | -1.345 | 0.121 |
| macrophage_unactivated | 0.0 | 0.129 |
| IL1 | -0.243 | -0.519 |
| Rapamycin | 0.239 | 0.7 |
| Tcell | -0.554 | -0.277 |
| GMCSF | -0.694 | -1.769 |
| IFNab | -0.795 | -1.645 |
| IFNg | 0.208 | -1.147 |
| IFNg_GMCSF1 | -0.826 | -2.105 |
| Rv1432_day32 | -1.752 | -2.726 |
| Rv1565c_day32 | 1.047 | 0.49 |
| secA2_input | 1.291 | 1.509 |
| delta_Rv3594 | -0.471 | 1.576 |
| delta_Rv3717 | -2.153 | -0.522 |
| delta_Rv3811 | -1.374 | 0.311 |
| delta_Rv0954 | -1.395 | -0.699 |
| PonA1 | -0.643 | 0.211 |
| EccD1_KO | -3.526 | 0.678 |
| EspI_KO | -2.892 | 0.0 |
| PE35_KO | -0.21 | 2.438 |
| PPE68_KO | -1.344 | 1.801 |
| glycerol2 | -1.665 | -4.161 |
| lignocerate | 0.124 | -1.458 |
| oleate | -2.691 | -5.464 |
| phosphatidylcholine | 0.63 | -0.416 |
| acetate | 2.233 | 0.625 |
| glucAc | 1.894 | 0.656 |
| Rv0950ko | 0.6 | -0.344 |
| Rv1096ko | -2.962 | -3.308 |
| Rv3684ko | -0.059 | -1.159 |
| delta_otsA_trehalose | 0.289 | -0.329 |