Top 10 genes with highest correlation to Rv1823/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0012/- | (cc=0.8471) | info on Rv0012/- |
| Rv1825/- | (cc=0.8321) | info on Rv1825/- |
| Rv1824/- | (cc=0.7407) | info on Rv1824/- |
| Rv3586/- | (cc=0.7127) | info on Rv3586/- |
| Rv2203/- | (cc=0.6944) | info on Rv2203/- |
| Rv0483/lprQ | (cc=0.6835) | info on Rv0483/lprQ |
| Rv2091c/- | (cc=0.6767) | info on Rv2091c/- |
| Rv1331/- | (cc=0.6466) | info on Rv1331/- |
| Rv2171/lppM | (cc=0.633) | info on Rv2171/lppM |
| Rv3682/ponA2 | (cc=0.5926) | info on Rv3682/ponA2 |
Correlation of Rv1823/- with Rv0483/lprQ
Normalized LFCs for Rv1823/-:
(description and provenance of datasets)
| Rv1823/- | Rv0483/lprQ | |
| Fe_supp_jason_reseq | 2.807 | 0.944 |
| low_pH_jason_reseq | 1.302 | 0.402 |
| NO_jason_reseq | -1.273 | -1.139 |
| B6_jason_reseq | 0.723 | 0.621 |
| MHCII_jason_reseq | 0.818 | 1.322 |
| Isoniazid02 | -0.074 | -0.064 |
| Rifampicin4 | -2.989 | -0.986 |
| Ethambutol3 | -1.369 | -0.601 |
| Meropenem3 | -0.63 | 0.04 |
| Vancomycin16 | -4.717 | -1.817 |
| Rv2680_day32 | -2.814 | 0.398 |
| H37Rv_KO_MarP | 5.537 | 1.634 |
| hypoxia_3wks | -1.483 | 0.443 |
| hypoxia_6wks | -2.088 | -0.159 |
| glycerol | 0.056 | 0.989 |
| cholesterol | -0.676 | 0.409 |
| AJ | -1.849 | -0.188 |
| Bibs02 | -0.525 | 0.07 |
| Bibs02c | -1.269 | 0.343 |
| BL6 | -2.291 | -0.172 |
| BL6a | -1.637 | -0.227 |
| BXD01 | -2.743 | -0.541 |
| BXD010 | -2.697 | -0.508 |
| BXD011 | -1.517 | -0.304 |
| BXD03 | -2.848 | -0.797 |
| BXD04 | -2.481 | -0.634 |
| BXD05 | -2.465 | -0.651 |
| BXD06 | -2.811 | -0.698 |
| BXD07 | -2.777 | -0.508 |
| BXD08 | -2.668 | -0.606 |
| BXD09 | -2.959 | -0.583 |
| CAST | -2.459 | -0.334 |
| CCcont | 0.021 | 0.352 |
| DS01 | -3.389 | -0.094 |
| DS02 | -3.121 | -0.315 |
| DS04 | -3.009 | -0.894 |
| DS0c | -1.86 | 0.36 |
| GP01 | -1.808 | 0.152 |
| GP02 | -1.669 | -0.415 |
| GP0c | -0.924 | 0.179 |
| NOD | -2.312 | -0.241 |
| NZO | -3.094 | -0.195 |
| PWK | -3.44 | -1.421 |
| H37Rv_KO_CtpC | 0.067 | 0.972 |
| H37Rv_KO_CtpD | 0.035 | 0.019 |
| H37Rv_KO_Rv1272 | -1.166 | 0.259 |
| H37Rv_KO_SugABC | -1.987 | -0.402 |
| H37Rv_KO_MbtN | -0.952 | -0.382 |
| Trans05 | -1.345 | -0.409 |
| macrophage_unactivated | 0.0 | 0.016 |
| IL1 | -0.243 | -0.314 |
| Rapamycin | 0.239 | 0.212 |
| Tcell | -0.554 | -0.701 |
| GMCSF | -0.694 | 0.908 |
| IFNab | -0.795 | 0.082 |
| IFNg | 0.208 | -0.163 |
| IFNg_GMCSF1 | -0.826 | -0.016 |
| Rv1432_day32 | -1.752 | 0.143 |
| Rv1565c_day32 | 1.047 | 0.42 |
| secA2_input | 1.291 | 0.62 |
| delta_Rv3594 | -0.471 | 0.222 |
| delta_Rv3717 | -2.153 | -0.685 |
| delta_Rv3811 | -1.374 | 0.031 |
| delta_Rv0954 | -1.395 | -0.384 |
| PonA1 | -0.643 | -0.077 |
| EccD1_KO | -3.526 | -0.599 |
| EspI_KO | -2.892 | -0.322 |
| PE35_KO | -0.21 | -0.379 |
| PPE68_KO | -1.344 | -0.912 |
| glycerol2 | -1.665 | 0.339 |
| lignocerate | 0.124 | 0.386 |
| oleate | -2.691 | -0.172 |
| phosphatidylcholine | 0.63 | 0.56 |
| acetate | 2.233 | -0.465 |
| glucAc | 1.894 | -0.285 |
| Rv0950ko | 0.6 | 0.778 |
| Rv1096ko | -2.962 | -0.35 |
| Rv3684ko | -0.059 | 0.036 |
| delta_otsA_trehalose | 0.289 | 0.308 |