Top 10 genes with highest correlation to Rv1136/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0084/hycD | (cc=0.5026) | info on Rv0084/hycD |
| Rv1494/mazE4 | (cc=0.4811) | info on Rv1494/mazE4 |
| Rv0899/ompA | (cc=0.4789) | info on Rv0899/ompA |
| Rv0034/- | (cc=0.4692) | info on Rv0034/- |
| Rv0800/pepC | (cc=0.4591) | info on Rv0800/pepC |
| Rv1731/gabD2 | (cc=0.4468) | info on Rv1731/gabD2 |
| Rv3083/- | (cc=0.445) | info on Rv3083/- |
| Rv1974/- | (cc=0.4435) | info on Rv1974/- |
| Rv3439c/- | (cc=0.4427) | info on Rv3439c/- |
| Rv3004/cfp6 | (cc=0.4378) | info on Rv3004/cfp6 |
Correlation of Rv1136/- with Rv3004/cfp6
Normalized LFCs for Rv1136/-:
(description and provenance of datasets)
| Rv1136/- | Rv3004/cfp6 | |
| Fe_supp_jason_reseq | -1.075 | -1.746 |
| low_pH_jason_reseq | -0.873 | -2.802 |
| NO_jason_reseq | -1.076 | -0.215 |
| B6_jason_reseq | 0.28 | 1.311 |
| MHCII_jason_reseq | 0.933 | -0.604 |
| Isoniazid02 | 1.455 | -0.308 |
| Rifampicin4 | 0.195 | 0.23 |
| Ethambutol3 | 1.571 | -0.711 |
| Meropenem3 | 0.42 | -0.624 |
| Vancomycin16 | 0.3 | 0.114 |
| Rv2680_day32 | -0.795 | 0.131 |
| H37Rv_KO_MarP | -0.412 | -0.845 |
| hypoxia_3wks | -0.275 | -0.231 |
| hypoxia_6wks | 1.524 | 0.541 |
| glycerol | 1.031 | 0.471 |
| cholesterol | 0.625 | -0.156 |
| AJ | -0.232 | 0.834 |
| Bibs02 | -0.521 | 1.317 |
| Bibs02c | 0.212 | -0.406 |
| BL6 | 0.237 | -0.49 |
| BL6a | -0.759 | 0.888 |
| BXD01 | 0.194 | 0.352 |
| BXD010 | 0.533 | -0.728 |
| BXD011 | -1.067 | 0.491 |
| BXD03 | 0.25 | 0.085 |
| BXD04 | -1.103 | 0.395 |
| BXD05 | 1.569 | 0.43 |
| BXD06 | 0.266 | -0.418 |
| BXD07 | 0.387 | 0.0 |
| BXD08 | -0.241 | 0.013 |
| BXD09 | -0.095 | 0.938 |
| CAST | -0.729 | 0.991 |
| CCcont | 0.369 | 0.0 |
| DS01 | 0.926 | 1.711 |
| DS02 | -0.066 | 1.418 |
| DS04 | 0.101 | -0.271 |
| DS0c | -0.985 | 1.738 |
| GP01 | 0.023 | -0.309 |
| GP02 | -0.284 | -1.639 |
| GP0c | -1.272 | -1.209 |
| NOD | -2.73 | 0.142 |
| NZO | 0.397 | 2.068 |
| PWK | -1.04 | -0.404 |
| H37Rv_KO_CtpC | -0.83 | -3.53 |
| H37Rv_KO_CtpD | -2.482 | -2.851 |
| H37Rv_KO_Rv1272 | -0.72 | -0.124 |
| H37Rv_KO_SugABC | -2.201 | -2.014 |
| H37Rv_KO_MbtN | -1.98 | -0.417 |
| Trans05 | -2.13 | -0.807 |
| macrophage_unactivated | -0.183 | 0.492 |
| IL1 | -0.581 | 0.039 |
| Rapamycin | -0.522 | 0.813 |
| Tcell | 1.597 | 2.095 |
| GMCSF | 1.761 | 0.29 |
| IFNab | 0.269 | 0.366 |
| IFNg | 1.331 | 2.245 |
| IFNg_GMCSF1 | -1.185 | 0.233 |
| Rv1432_day32 | -0.18 | -1.079 |
| Rv1565c_day32 | 0.556 | -1.229 |
| secA2_input | 1.049 | -3.611 |
| delta_Rv3594 | 1.655 | 1.869 |
| delta_Rv3717 | 2.103 | 0.405 |
| delta_Rv3811 | 1.358 | 1.096 |
| delta_Rv0954 | 1.368 | 1.613 |
| PonA1 | 0.107 | 2.748 |
| EccD1_KO | 0.467 | 3.983 |
| EspI_KO | 2.481 | 4.195 |
| PE35_KO | 1.986 | 3.209 |
| PPE68_KO | 1.6 | 2.003 |
| glycerol2 | 0.569 | 0.834 |
| lignocerate | 1.627 | 0.952 |
| oleate | -1.94 | 0.948 |
| phosphatidylcholine | 1.087 | 0.466 |
| acetate | 1.491 | 0.457 |
| glucAc | 1.359 | 0.415 |
| Rv0950ko | 1.423 | 1.061 |
| Rv1096ko | 1.686 | 2.147 |
| Rv3684ko | 0.295 | 0.567 |
| delta_otsA_trehalose | 0.122 | -0.837 |