Top 10 genes with highest correlation to Rv1136/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0084/hycD | (cc=0.5026) | info on Rv0084/hycD |
| Rv1494/mazE4 | (cc=0.4811) | info on Rv1494/mazE4 |
| Rv0899/ompA | (cc=0.4789) | info on Rv0899/ompA |
| Rv0034/- | (cc=0.4692) | info on Rv0034/- |
| Rv0800/pepC | (cc=0.4591) | info on Rv0800/pepC |
| Rv1731/gabD2 | (cc=0.4468) | info on Rv1731/gabD2 |
| Rv3083/- | (cc=0.445) | info on Rv3083/- |
| Rv1974/- | (cc=0.4435) | info on Rv1974/- |
| Rv3439c/- | (cc=0.4427) | info on Rv3439c/- |
| Rv3004/cfp6 | (cc=0.4378) | info on Rv3004/cfp6 |
Correlation of Rv1136/- with Rv0034/-
Normalized LFCs for Rv1136/-:
(description and provenance of datasets)
| Rv1136/- | Rv0034/- | |
| Fe_supp_jason_reseq | -1.075 | 0.354 |
| low_pH_jason_reseq | -0.873 | -1.855 |
| NO_jason_reseq | -1.076 | -0.62 |
| B6_jason_reseq | 0.28 | 0.293 |
| MHCII_jason_reseq | 0.933 | -0.317 |
| Isoniazid02 | 1.455 | 0.867 |
| Rifampicin4 | 0.195 | -1.443 |
| Ethambutol3 | 1.571 | 1.136 |
| Meropenem3 | 0.42 | -1.217 |
| Vancomycin16 | 0.3 | -1.088 |
| Rv2680_day32 | -0.795 | 0.339 |
| H37Rv_KO_MarP | -0.412 | -0.401 |
| hypoxia_3wks | -0.275 | 0.347 |
| hypoxia_6wks | 1.524 | 0.837 |
| glycerol | 1.031 | -0.328 |
| cholesterol | 0.625 | 0.344 |
| AJ | -0.232 | -0.133 |
| Bibs02 | -0.521 | -0.159 |
| Bibs02c | 0.212 | 0.243 |
| BL6 | 0.237 | 0.169 |
| BL6a | -0.759 | -0.453 |
| BXD01 | 0.194 | -1.049 |
| BXD010 | 0.533 | 1.343 |
| BXD011 | -1.067 | 0.604 |
| BXD03 | 0.25 | -1.173 |
| BXD04 | -1.103 | -0.13 |
| BXD05 | 1.569 | -0.1 |
| BXD06 | 0.266 | -0.343 |
| BXD07 | 0.387 | 0.153 |
| BXD08 | -0.241 | -0.084 |
| BXD09 | -0.095 | 0.244 |
| CAST | -0.729 | -0.013 |
| CCcont | 0.369 | -0.175 |
| DS01 | 0.926 | 1.179 |
| DS02 | -0.066 | 1.062 |
| DS04 | 0.101 | 0.374 |
| DS0c | -0.985 | 1.029 |
| GP01 | 0.023 | -0.507 |
| GP02 | -0.284 | -0.362 |
| GP0c | -1.272 | -0.831 |
| NOD | -2.73 | -0.063 |
| NZO | 0.397 | -0.66 |
| PWK | -1.04 | 0.227 |
| H37Rv_KO_CtpC | -0.83 | 0.018 |
| H37Rv_KO_CtpD | -2.482 | -1.234 |
| H37Rv_KO_Rv1272 | -0.72 | -0.991 |
| H37Rv_KO_SugABC | -2.201 | -0.291 |
| H37Rv_KO_MbtN | -1.98 | -0.597 |
| Trans05 | -2.13 | -0.212 |
| macrophage_unactivated | -0.183 | -0.925 |
| IL1 | -0.581 | -1.219 |
| Rapamycin | -0.522 | -0.924 |
| Tcell | 1.597 | -0.225 |
| GMCSF | 1.761 | 0.895 |
| IFNab | 0.269 | -0.429 |
| IFNg | 1.331 | 0.0 |
| IFNg_GMCSF1 | -1.185 | -0.239 |
| Rv1432_day32 | -0.18 | -0.288 |
| Rv1565c_day32 | 0.556 | 0.886 |
| secA2_input | 1.049 | 0.991 |
| delta_Rv3594 | 1.655 | 0.463 |
| delta_Rv3717 | 2.103 | -0.313 |
| delta_Rv3811 | 1.358 | 0.858 |
| delta_Rv0954 | 1.368 | 1.426 |
| PonA1 | 0.107 | 0.599 |
| EccD1_KO | 0.467 | 0.418 |
| EspI_KO | 2.481 | -0.396 |
| PE35_KO | 1.986 | 0.84 |
| PPE68_KO | 1.6 | 0.141 |
| glycerol2 | 0.569 | 0.82 |
| lignocerate | 1.627 | 1.859 |
| oleate | -1.94 | -1.06 |
| phosphatidylcholine | 1.087 | 0.545 |
| acetate | 1.491 | 1.453 |
| glucAc | 1.359 | 1.763 |
| Rv0950ko | 1.423 | 1.052 |
| Rv1096ko | 1.686 | 1.58 |
| Rv3684ko | 0.295 | 0.747 |
| delta_otsA_trehalose | 0.122 | -1.032 |