Top 10 genes with highest correlation to Rv1136/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0084/hycD | (cc=0.5026) | info on Rv0084/hycD |
| Rv1494/mazE4 | (cc=0.4811) | info on Rv1494/mazE4 |
| Rv0899/ompA | (cc=0.4789) | info on Rv0899/ompA |
| Rv0034/- | (cc=0.4692) | info on Rv0034/- |
| Rv0800/pepC | (cc=0.4591) | info on Rv0800/pepC |
| Rv1731/gabD2 | (cc=0.4468) | info on Rv1731/gabD2 |
| Rv3083/- | (cc=0.445) | info on Rv3083/- |
| Rv1974/- | (cc=0.4435) | info on Rv1974/- |
| Rv3439c/- | (cc=0.4427) | info on Rv3439c/- |
| Rv3004/cfp6 | (cc=0.4378) | info on Rv3004/cfp6 |
Correlation of Rv1136/- with Rv0899/ompA
Normalized LFCs for Rv1136/-:
(description and provenance of datasets)
| Rv1136/- | Rv0899/ompA | |
| Fe_supp_jason_reseq | -1.075 | -0.253 |
| low_pH_jason_reseq | -0.873 | -0.795 |
| NO_jason_reseq | -1.076 | -0.651 |
| B6_jason_reseq | 0.28 | 1.151 |
| MHCII_jason_reseq | 0.933 | 1.096 |
| Isoniazid02 | 1.455 | -0.125 |
| Rifampicin4 | 0.195 | 0.558 |
| Ethambutol3 | 1.571 | 0.309 |
| Meropenem3 | 0.42 | -0.034 |
| Vancomycin16 | 0.3 | 0.483 |
| Rv2680_day32 | -0.795 | -0.012 |
| H37Rv_KO_MarP | -0.412 | 0.282 |
| hypoxia_3wks | -0.275 | 0.0 |
| hypoxia_6wks | 1.524 | -0.359 |
| glycerol | 1.031 | -0.974 |
| cholesterol | 0.625 | -0.597 |
| AJ | -0.232 | -0.662 |
| Bibs02 | -0.521 | 0.733 |
| Bibs02c | 0.212 | -0.794 |
| BL6 | 0.237 | 0.411 |
| BL6a | -0.759 | -0.595 |
| BXD01 | 0.194 | 0.795 |
| BXD010 | 0.533 | 0.689 |
| BXD011 | -1.067 | -0.345 |
| BXD03 | 0.25 | 0.226 |
| BXD04 | -1.103 | -0.133 |
| BXD05 | 1.569 | -0.128 |
| BXD06 | 0.266 | -0.094 |
| BXD07 | 0.387 | 0.219 |
| BXD08 | -0.241 | 0.689 |
| BXD09 | -0.095 | 0.108 |
| CAST | -0.729 | 0.177 |
| CCcont | 0.369 | 0.321 |
| DS01 | 0.926 | 0.327 |
| DS02 | -0.066 | 0.838 |
| DS04 | 0.101 | 0.306 |
| DS0c | -0.985 | 0.695 |
| GP01 | 0.023 | -1.872 |
| GP02 | -0.284 | -1.771 |
| GP0c | -1.272 | -1.435 |
| NOD | -2.73 | -0.449 |
| NZO | 0.397 | 0.215 |
| PWK | -1.04 | 0.348 |
| H37Rv_KO_CtpC | -0.83 | 0.192 |
| H37Rv_KO_CtpD | -2.482 | -1.398 |
| H37Rv_KO_Rv1272 | -0.72 | -2.109 |
| H37Rv_KO_SugABC | -2.201 | -1.529 |
| H37Rv_KO_MbtN | -1.98 | -0.844 |
| Trans05 | -2.13 | -0.678 |
| macrophage_unactivated | -0.183 | 0.0 |
| IL1 | -0.581 | -0.917 |
| Rapamycin | -0.522 | -1.083 |
| Tcell | 1.597 | -0.173 |
| GMCSF | 1.761 | -0.76 |
| IFNab | 0.269 | -1.134 |
| IFNg | 1.331 | -0.714 |
| IFNg_GMCSF1 | -1.185 | -1.04 |
| Rv1432_day32 | -0.18 | -0.412 |
| Rv1565c_day32 | 0.556 | -0.199 |
| secA2_input | 1.049 | 0.881 |
| delta_Rv3594 | 1.655 | 1.958 |
| delta_Rv3717 | 2.103 | 1.258 |
| delta_Rv3811 | 1.358 | 0.766 |
| delta_Rv0954 | 1.368 | 1.005 |
| PonA1 | 0.107 | 1.114 |
| EccD1_KO | 0.467 | 1.253 |
| EspI_KO | 2.481 | 0.622 |
| PE35_KO | 1.986 | 0.283 |
| PPE68_KO | 1.6 | 1.459 |
| glycerol2 | 0.569 | -0.025 |
| lignocerate | 1.627 | 0.638 |
| oleate | -1.94 | -0.693 |
| phosphatidylcholine | 1.087 | 0.261 |
| acetate | 1.491 | 0.953 |
| glucAc | 1.359 | 1.757 |
| Rv0950ko | 1.423 | 0.184 |
| Rv1096ko | 1.686 | -0.609 |
| Rv3684ko | 0.295 | -0.662 |
| delta_otsA_trehalose | 0.122 | 0.048 |