Top 10 genes with highest correlation to Rv1119c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2410c/- | (cc=0.5) | info on Rv2410c/- |
| Rv3416/whiB3 | (cc=0.4872) | info on Rv3416/whiB3 |
| Rv0692/- | (cc=0.4779) | info on Rv0692/- |
| Rv3057c/- | (cc=0.4714) | info on Rv3057c/- |
| Rv3616c/espA | (cc=0.4599) | info on Rv3616c/espA |
| Rv3614c/espD | (cc=0.4468) | info on Rv3614c/espD |
| Rv1282c/oppC | (cc=0.4423) | info on Rv1282c/oppC |
| Rv2606c/snzP | (cc=0.4286) | info on Rv2606c/snzP |
| Rv1465/- | (cc=0.4266) | info on Rv1465/- |
| Rv3870/eccCa1 | (cc=0.4227) | info on Rv3870/eccCa1 |
Correlation of Rv1119c/- with Rv3614c/espD
Normalized LFCs for Rv1119c/-:
(description and provenance of datasets)
| Rv1119c/- | Rv3614c/espD | |
| Fe_supp_jason_reseq | -1.94 | -0.587 |
| low_pH_jason_reseq | 1.328 | -0.668 |
| NO_jason_reseq | 0.0 | -0.795 |
| B6_jason_reseq | -3.226 | -2.337 |
| MHCII_jason_reseq | -2.841 | -2.243 |
| Isoniazid02 | 0.31 | 0.007 |
| Rifampicin4 | 0.799 | -0.187 |
| Ethambutol3 | 1.509 | 0.499 |
| Meropenem3 | 1.584 | 0.052 |
| Vancomycin16 | -0.178 | 0.013 |
| Rv2680_day32 | 0.027 | -1.55 |
| H37Rv_KO_MarP | 0.597 | 1.281 |
| hypoxia_3wks | 0.574 | -0.159 |
| hypoxia_6wks | 2.165 | -1.084 |
| glycerol | -0.827 | -1.3 |
| cholesterol | -0.869 | -0.729 |
| AJ | 0.521 | -5.192 |
| Bibs02 | -1.584 | -5.457 |
| Bibs02c | -1.958 | -4.547 |
| BL6 | -2.122 | -1.299 |
| BL6a | -3.86 | -4.873 |
| BXD01 | -1.946 | -2.886 |
| BXD010 | -2.624 | -2.241 |
| BXD011 | -1.444 | -2.548 |
| BXD03 | -2.77 | -2.31 |
| BXD04 | -2.533 | -2.767 |
| BXD05 | -0.146 | -1.613 |
| BXD06 | -2.735 | -2.794 |
| BXD07 | 0.261 | -2.523 |
| BXD08 | -2.471 | -3.347 |
| BXD09 | -2.283 | -3.276 |
| CAST | -0.175 | -3.997 |
| CCcont | -1.828 | -0.378 |
| DS01 | -4.389 | -6.0 |
| DS02 | -1.544 | -6.0 |
| DS04 | -2.898 | -3.847 |
| DS0c | -1.136 | -5.276 |
| GP01 | -1.752 | -1.875 |
| GP02 | -1.705 | -2.344 |
| GP0c | -1.041 | -1.179 |
| NOD | -1.347 | 0.153 |
| NZO | -1.045 | -6.0 |
| PWK | -1.076 | -4.825 |
| H37Rv_KO_CtpC | 0.024 | -1.587 |
| H37Rv_KO_CtpD | -1.141 | -1.102 |
| H37Rv_KO_Rv1272 | -2.393 | -1.097 |
| H37Rv_KO_SugABC | -1.312 | -2.464 |
| H37Rv_KO_MbtN | -0.732 | 0.817 |
| Trans05 | 0.611 | -0.72 |
| macrophage_unactivated | -2.033 | -0.218 |
| IL1 | 1.904 | -0.148 |
| Rapamycin | -0.988 | -0.672 |
| Tcell | -0.6 | -1.235 |
| GMCSF | 1.059 | 0.016 |
| IFNab | -0.363 | 1.128 |
| IFNg | 0.572 | -1.098 |
| IFNg_GMCSF1 | -1.012 | 0.682 |
| Rv1432_day32 | 0.0 | -1.13 |
| Rv1565c_day32 | 0.957 | -3.097 |
| secA2_input | -5.036 | -0.873 |
| delta_Rv3594 | -0.72 | 0.242 |
| delta_Rv3717 | -1.699 | -0.596 |
| delta_Rv3811 | -1.808 | -0.433 |
| delta_Rv0954 | -2.145 | -0.437 |
| PonA1 | 0.16 | -1.641 |
| EccD1_KO | 2.68 | 0.572 |
| EspI_KO | 2.056 | 1.514 |
| PE35_KO | -1.263 | 1.082 |
| PPE68_KO | 0.25 | 1.222 |
| glycerol2 | 0.0 | 1.184 |
| lignocerate | 0.0 | 0.6 |
| oleate | 0.0 | 1.136 |
| phosphatidylcholine | 0.0 | 0.262 |
| acetate | 1.127 | -0.153 |
| glucAc | 0.957 | -0.228 |
| Rv0950ko | -2.262 | 0.485 |
| Rv1096ko | -1.291 | -0.6 |
| Rv3684ko | -1.235 | -0.766 |
| delta_otsA_trehalose | 0.468 | 0.89 |