Top 10 genes with highest correlation to Rv1119c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2410c/- | (cc=0.5) | info on Rv2410c/- |
| Rv3416/whiB3 | (cc=0.4872) | info on Rv3416/whiB3 |
| Rv0692/- | (cc=0.4779) | info on Rv0692/- |
| Rv3057c/- | (cc=0.4714) | info on Rv3057c/- |
| Rv3616c/espA | (cc=0.4599) | info on Rv3616c/espA |
| Rv3614c/espD | (cc=0.4468) | info on Rv3614c/espD |
| Rv1282c/oppC | (cc=0.4423) | info on Rv1282c/oppC |
| Rv2606c/snzP | (cc=0.4286) | info on Rv2606c/snzP |
| Rv1465/- | (cc=0.4266) | info on Rv1465/- |
| Rv3870/eccCa1 | (cc=0.4227) | info on Rv3870/eccCa1 |
Correlation of Rv1119c/- with Rv1465/-
Normalized LFCs for Rv1119c/-:
(description and provenance of datasets)
| Rv1119c/- | Rv1465/- | |
| Fe_supp_jason_reseq | -1.94 | -1.579 |
| low_pH_jason_reseq | 1.328 | -0.095 |
| NO_jason_reseq | 0.0 | -3.258 |
| B6_jason_reseq | -3.226 | -0.991 |
| MHCII_jason_reseq | -2.841 | -1.348 |
| Isoniazid02 | 0.31 | 0.0 |
| Rifampicin4 | 0.799 | 0.0 |
| Ethambutol3 | 1.509 | 0.0 |
| Meropenem3 | 1.584 | 0.0 |
| Vancomycin16 | -0.178 | 0.0 |
| Rv2680_day32 | 0.027 | 0.0 |
| H37Rv_KO_MarP | 0.597 | 0.476 |
| hypoxia_3wks | 0.574 | 0.0 |
| hypoxia_6wks | 2.165 | -0.549 |
| glycerol | -0.827 | -1.609 |
| cholesterol | -0.869 | 0.19 |
| AJ | 0.521 | 0.079 |
| Bibs02 | -1.584 | -0.273 |
| Bibs02c | -1.958 | -1.241 |
| BL6 | -2.122 | -1.436 |
| BL6a | -3.86 | -1.301 |
| BXD01 | -1.946 | -1.496 |
| BXD010 | -2.624 | -1.471 |
| BXD011 | -1.444 | -1.113 |
| BXD03 | -2.77 | -1.553 |
| BXD04 | -2.533 | -1.42 |
| BXD05 | -0.146 | -1.545 |
| BXD06 | -2.735 | -1.533 |
| BXD07 | 0.261 | -1.59 |
| BXD08 | -2.471 | -1.527 |
| BXD09 | -2.283 | -1.614 |
| CAST | -0.175 | -1.099 |
| CCcont | -1.828 | -1.715 |
| DS01 | -4.389 | -1.001 |
| DS02 | -1.544 | -2.083 |
| DS04 | -2.898 | -1.546 |
| DS0c | -1.136 | 1.112 |
| GP01 | -1.752 | -1.134 |
| GP02 | -1.705 | -0.872 |
| GP0c | -1.041 | -1.036 |
| NOD | -1.347 | -1.476 |
| NZO | -1.045 | -0.845 |
| PWK | -1.076 | -1.563 |
| H37Rv_KO_CtpC | 0.024 | 1.665 |
| H37Rv_KO_CtpD | -1.141 | -0.092 |
| H37Rv_KO_Rv1272 | -2.393 | -0.457 |
| H37Rv_KO_SugABC | -1.312 | -1.137 |
| H37Rv_KO_MbtN | -0.732 | -0.987 |
| Trans05 | 0.611 | -0.554 |
| macrophage_unactivated | -2.033 | -0.83 |
| IL1 | 1.904 | -0.78 |
| Rapamycin | -0.988 | -0.807 |
| Tcell | -0.6 | -0.857 |
| GMCSF | 1.059 | -0.694 |
| IFNab | -0.363 | -0.795 |
| IFNg | 0.572 | -0.703 |
| IFNg_GMCSF1 | -1.012 | 0.0 |
| Rv1432_day32 | 0.0 | 0.0 |
| Rv1565c_day32 | 0.957 | 0.0 |
| secA2_input | -5.036 | -0.377 |
| delta_Rv3594 | -0.72 | -0.742 |
| delta_Rv3717 | -1.699 | 0.126 |
| delta_Rv3811 | -1.808 | -0.721 |
| delta_Rv0954 | -2.145 | 1.957 |
| PonA1 | 0.16 | -0.56 |
| EccD1_KO | 2.68 | 1.059 |
| EspI_KO | 2.056 | 1.891 |
| PE35_KO | -1.263 | 1.21 |
| PPE68_KO | 0.25 | 0.71 |
| glycerol2 | 0.0 | 0.0 |
| lignocerate | 0.0 | 0.0 |
| oleate | 0.0 | 0.0 |
| phosphatidylcholine | 0.0 | 0.0 |
| acetate | 1.127 | 0.0 |
| glucAc | 0.957 | 0.0 |
| Rv0950ko | -2.262 | -2.376 |
| Rv1096ko | -1.291 | -1.65 |
| Rv3684ko | -1.235 | -3.033 |
| delta_otsA_trehalose | 0.468 | -0.564 |