Top 10 genes with highest correlation to Rv1119c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2410c/- | (cc=0.5) | info on Rv2410c/- |
| Rv3416/whiB3 | (cc=0.4872) | info on Rv3416/whiB3 |
| Rv0692/- | (cc=0.4779) | info on Rv0692/- |
| Rv3057c/- | (cc=0.4714) | info on Rv3057c/- |
| Rv3616c/espA | (cc=0.4599) | info on Rv3616c/espA |
| Rv3614c/espD | (cc=0.4468) | info on Rv3614c/espD |
| Rv1282c/oppC | (cc=0.4423) | info on Rv1282c/oppC |
| Rv2606c/snzP | (cc=0.4286) | info on Rv2606c/snzP |
| Rv1465/- | (cc=0.4266) | info on Rv1465/- |
| Rv3870/eccCa1 | (cc=0.4227) | info on Rv3870/eccCa1 |
Correlation of Rv1119c/- with Rv2606c/snzP
Normalized LFCs for Rv1119c/-:
(description and provenance of datasets)
| Rv1119c/- | Rv2606c/snzP | |
| Fe_supp_jason_reseq | -1.94 | -0.532 |
| low_pH_jason_reseq | 1.328 | 1.435 |
| NO_jason_reseq | 0.0 | -1.089 |
| B6_jason_reseq | -3.226 | -2.511 |
| MHCII_jason_reseq | -2.841 | -1.955 |
| Isoniazid02 | 0.31 | 1.526 |
| Rifampicin4 | 0.799 | 0.322 |
| Ethambutol3 | 1.509 | 0.0 |
| Meropenem3 | 1.584 | 2.004 |
| Vancomycin16 | -0.178 | 0.066 |
| Rv2680_day32 | 0.027 | -2.619 |
| H37Rv_KO_MarP | 0.597 | 0.454 |
| hypoxia_3wks | 0.574 | -1.033 |
| hypoxia_6wks | 2.165 | -0.649 |
| glycerol | -0.827 | -4.166 |
| cholesterol | -0.869 | -2.988 |
| AJ | 0.521 | -4.787 |
| Bibs02 | -1.584 | -3.772 |
| Bibs02c | -1.958 | -4.317 |
| BL6 | -2.122 | -2.581 |
| BL6a | -3.86 | -4.087 |
| BXD01 | -1.946 | -2.687 |
| BXD010 | -2.624 | -2.642 |
| BXD011 | -1.444 | -2.628 |
| BXD03 | -2.77 | -2.79 |
| BXD04 | -2.533 | -2.551 |
| BXD05 | -0.146 | -2.52 |
| BXD06 | -2.735 | -2.754 |
| BXD07 | 0.261 | -2.857 |
| BXD08 | -2.471 | -2.744 |
| BXD09 | -2.283 | -2.899 |
| CAST | -0.175 | -3.62 |
| CCcont | -1.828 | 0.366 |
| DS01 | -4.389 | -4.637 |
| DS02 | -1.544 | -4.487 |
| DS04 | -2.898 | -3.809 |
| DS0c | -1.136 | -4.475 |
| GP01 | -1.752 | -2.037 |
| GP02 | -1.705 | -1.717 |
| GP0c | -1.041 | -1.102 |
| NOD | -1.347 | -3.254 |
| NZO | -1.045 | -4.115 |
| PWK | -1.076 | -3.851 |
| H37Rv_KO_CtpC | 0.024 | -3.042 |
| H37Rv_KO_CtpD | -1.141 | -2.076 |
| H37Rv_KO_Rv1272 | -2.393 | -2.91 |
| H37Rv_KO_SugABC | -1.312 | -1.855 |
| H37Rv_KO_MbtN | -0.732 | 0.204 |
| Trans05 | 0.611 | -2.696 |
| macrophage_unactivated | -2.033 | 1.405 |
| IL1 | 1.904 | 0.433 |
| Rapamycin | -0.988 | 0.273 |
| Tcell | -0.6 | 0.74 |
| GMCSF | 1.059 | 1.624 |
| IFNab | -0.363 | 1.137 |
| IFNg | 0.572 | 1.005 |
| IFNg_GMCSF1 | -1.012 | 0.459 |
| Rv1432_day32 | 0.0 | -0.632 |
| Rv1565c_day32 | 0.957 | -0.415 |
| secA2_input | -5.036 | -1.183 |
| delta_Rv3594 | -0.72 | 0.878 |
| delta_Rv3717 | -1.699 | 0.0 |
| delta_Rv3811 | -1.808 | 0.642 |
| delta_Rv0954 | -2.145 | 1.11 |
| PonA1 | 0.16 | 1.579 |
| EccD1_KO | 2.68 | -2.082 |
| EspI_KO | 2.056 | -0.108 |
| PE35_KO | -1.263 | -2.112 |
| PPE68_KO | 0.25 | -1.328 |
| glycerol2 | 0.0 | 0.0 |
| lignocerate | 0.0 | 0.168 |
| oleate | 0.0 | 0.0 |
| phosphatidylcholine | 0.0 | 0.193 |
| acetate | 1.127 | 0.0 |
| glucAc | 0.957 | 0.272 |
| Rv0950ko | -2.262 | 0.389 |
| Rv1096ko | -1.291 | -0.971 |
| Rv3684ko | -1.235 | -1.641 |
| delta_otsA_trehalose | 0.468 | -1.003 |