Top 10 genes with highest correlation to Rv1049/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0178/- | (cc=0.4306) | info on Rv0178/- |
| Rv2229c/- | (cc=0.4059) | info on Rv2229c/- |
| Rv1325c/PE_PGRS24 | (cc=0.4039) | info on Rv1325c/PE_PGRS24 |
| Rv3549c/- | (cc=0.4006) | info on Rv3549c/- |
| Rv0541c/- | (cc=0.3995) | info on Rv0541c/- |
| Rv3229c/desA3 | (cc=0.3963) | info on Rv3229c/desA3 |
| Rv0199/- | (cc=0.3842) | info on Rv0199/- |
| Rv3072c/- | (cc=0.3748) | info on Rv3072c/- |
| Rv3913/trxB2 | (cc=0.3744) | info on Rv3913/trxB2 |
| Rv2271/- | (cc=0.3716) | info on Rv2271/- |
Correlation of Rv1049/- with Rv3913/trxB2
Normalized LFCs for Rv1049/-:
(description and provenance of datasets)
| Rv1049/- | Rv3913/trxB2 | |
| Fe_supp_jason_reseq | 1.435 | 0.415 |
| low_pH_jason_reseq | 1.566 | 0.0 |
| NO_jason_reseq | 2.116 | 0.995 |
| B6_jason_reseq | -0.889 | 0.153 |
| MHCII_jason_reseq | -1.04 | 0.474 |
| Isoniazid02 | -0.501 | -1.033 |
| Rifampicin4 | 0.661 | 0.0 |
| Ethambutol3 | 0.9 | -0.863 |
| Meropenem3 | -0.254 | 0.568 |
| Vancomycin16 | 0.329 | -0.963 |
| Rv2680_day32 | -0.386 | 1.268 |
| H37Rv_KO_MarP | 0.078 | 0.151 |
| hypoxia_3wks | 0.817 | 0.63 |
| hypoxia_6wks | 0.221 | -1.109 |
| glycerol | -0.772 | 0.0 |
| cholesterol | -0.292 | -0.216 |
| AJ | -0.998 | -0.751 |
| Bibs02 | -1.552 | -0.592 |
| Bibs02c | -1.234 | 0.517 |
| BL6 | -0.563 | 0.0 |
| BL6a | -1.191 | -0.296 |
| BXD01 | 0.482 | 0.695 |
| BXD010 | -0.017 | -0.543 |
| BXD011 | 0.291 | -0.412 |
| BXD03 | -0.637 | 0.334 |
| BXD04 | 0.855 | 0.162 |
| BXD05 | -0.091 | -0.57 |
| BXD06 | 0.076 | 0.09 |
| BXD07 | 0.507 | 0.093 |
| BXD08 | 1.06 | 0.594 |
| BXD09 | 0.399 | -0.328 |
| CAST | -0.03 | -0.167 |
| CCcont | -0.265 | 0.285 |
| DS01 | -0.015 | -0.765 |
| DS02 | 0.814 | 0.871 |
| DS04 | 0.921 | -0.141 |
| DS0c | -0.352 | 0.0 |
| GP01 | -0.665 | 0.347 |
| GP02 | 0.163 | 0.0 |
| GP0c | -0.497 | 0.799 |
| NOD | 0.841 | -0.335 |
| NZO | 0.09 | -0.845 |
| PWK | -0.132 | -0.458 |
| H37Rv_KO_CtpC | -0.575 | -0.688 |
| H37Rv_KO_CtpD | 0.52 | 1.298 |
| H37Rv_KO_Rv1272 | 0.721 | 0.811 |
| H37Rv_KO_SugABC | 1.351 | -0.321 |
| H37Rv_KO_MbtN | -0.128 | -0.437 |
| Trans05 | -0.669 | -0.554 |
| macrophage_unactivated | 2.039 | 0.65 |
| IL1 | -0.039 | -0.715 |
| Rapamycin | -0.663 | -0.74 |
| Tcell | 0.316 | 0.978 |
| GMCSF | -1.89 | -1.001 |
| IFNab | -0.744 | -0.348 |
| IFNg | 0.259 | -1.013 |
| IFNg_GMCSF1 | 0.487 | -0.361 |
| Rv1432_day32 | 0.08 | 0.0 |
| Rv1565c_day32 | -0.799 | 0.0 |
| secA2_input | -0.767 | -1.368 |
| delta_Rv3594 | 0.613 | 0.402 |
| delta_Rv3717 | 1.971 | 0.0 |
| delta_Rv3811 | 1.899 | 0.507 |
| delta_Rv0954 | 0.849 | -0.266 |
| PonA1 | 0.731 | -0.675 |
| EccD1_KO | -0.569 | -1.694 |
| EspI_KO | -1.492 | -2.102 |
| PE35_KO | -0.893 | -0.683 |
| PPE68_KO | -0.352 | -0.749 |
| glycerol2 | 0.46 | -0.318 |
| lignocerate | 0.481 | -0.885 |
| oleate | 1.099 | -0.132 |
| phosphatidylcholine | 0.901 | -0.472 |
| acetate | -0.203 | -0.826 |
| glucAc | 0.84 | -0.429 |
| Rv0950ko | 0.286 | 0.971 |
| Rv1096ko | 1.312 | 1.252 |
| Rv3684ko | 0.557 | 0.727 |
| delta_otsA_trehalose | 1.043 | 0.0 |