Top 10 genes with highest correlation to Rv1032c/trcS:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0228/- | (cc=0.6533) | info on Rv0228/- |
| Rv1758/cut1 | (cc=0.6474) | info on Rv1758/cut1 |
| Rv1708/- | (cc=0.6361) | info on Rv1708/- |
| Rv1180/pks3 | (cc=0.606) | info on Rv1180/pks3 |
| Rv2633c/- | (cc=0.6021) | info on Rv2633c/- |
| Rv1731/gabD2 | (cc=0.6015) | info on Rv1731/gabD2 |
| Rv0359/- | (cc=0.5924) | info on Rv0359/- |
| Rv3777/- | (cc=0.5903) | info on Rv3777/- |
| Rv0089/- | (cc=0.5822) | info on Rv0089/- |
| Rv2559c/- | (cc=0.5805) | info on Rv2559c/- |
Correlation of Rv1032c/trcS with Rv2633c/-
Normalized LFCs for Rv1032c/trcS:
(description and provenance of datasets)
| Rv1032c/trcS | Rv2633c/- | |
| Fe_supp_jason_reseq | 1.105 | -0.311 |
| low_pH_jason_reseq | -0.03 | -1.37 |
| NO_jason_reseq | 1.137 | 1.982 |
| B6_jason_reseq | 1.216 | 2.097 |
| MHCII_jason_reseq | 0.905 | 2.688 |
| Isoniazid02 | 0.697 | -1.835 |
| Rifampicin4 | -0.024 | 0.788 |
| Ethambutol3 | 0.691 | -1.015 |
| Meropenem3 | 0.374 | 1.543 |
| Vancomycin16 | 0.021 | 0.992 |
| Rv2680_day32 | 0.074 | -1.492 |
| H37Rv_KO_MarP | 0.652 | -0.251 |
| hypoxia_3wks | 0.112 | -1.635 |
| hypoxia_6wks | -0.311 | -0.935 |
| glycerol | -0.29 | -3.439 |
| cholesterol | -0.243 | -1.698 |
| AJ | 0.365 | -1.847 |
| Bibs02 | -0.993 | -2.015 |
| Bibs02c | -0.352 | -1.479 |
| BL6 | -0.772 | -4.097 |
| BL6a | -0.672 | -2.705 |
| BXD01 | -0.507 | -3.305 |
| BXD010 | -0.774 | -2.545 |
| BXD011 | -0.563 | -3.454 |
| BXD03 | -0.432 | -4.022 |
| BXD04 | -0.481 | -3.05 |
| BXD05 | -0.831 | -3.466 |
| BXD06 | -0.824 | -3.175 |
| BXD07 | -0.72 | -3.925 |
| BXD08 | -0.646 | -3.425 |
| BXD09 | -0.941 | -3.938 |
| CAST | -0.312 | -1.121 |
| CCcont | -0.394 | -3.226 |
| DS01 | -0.282 | -2.479 |
| DS02 | -0.695 | -2.478 |
| DS04 | 0.132 | -1.739 |
| DS0c | -0.328 | -3.309 |
| GP01 | 0.257 | -2.635 |
| GP02 | 0.309 | -2.268 |
| GP0c | -0.019 | -3.348 |
| NOD | 0.561 | -0.823 |
| NZO | -0.526 | -1.331 |
| PWK | 0.831 | -1.07 |
| H37Rv_KO_CtpC | -1.154 | -4.742 |
| H37Rv_KO_CtpD | -0.417 | -1.586 |
| H37Rv_KO_Rv1272 | -0.191 | -3.011 |
| H37Rv_KO_SugABC | -0.029 | -1.628 |
| H37Rv_KO_MbtN | -1.493 | -2.419 |
| Trans05 | -0.536 | -2.951 |
| macrophage_unactivated | -0.66 | -5.293 |
| IL1 | -0.914 | -4.974 |
| Rapamycin | -0.893 | -5.146 |
| Tcell | -1.059 | -4.558 |
| GMCSF | -0.385 | -4.605 |
| IFNab | -0.535 | -6.0 |
| IFNg | -1.109 | -4.145 |
| IFNg_GMCSF1 | -0.968 | -4.452 |
| Rv1432_day32 | -0.134 | -1.082 |
| Rv1565c_day32 | -0.28 | -0.234 |
| secA2_input | -0.363 | -0.355 |
| delta_Rv3594 | -0.095 | 0.136 |
| delta_Rv3717 | -0.413 | -1.179 |
| delta_Rv3811 | 0.036 | -0.013 |
| delta_Rv0954 | -0.82 | 0.286 |
| PonA1 | -0.043 | 0.524 |
| EccD1_KO | 0.516 | -0.987 |
| EspI_KO | 0.71 | -0.337 |
| PE35_KO | 0.169 | 0.435 |
| PPE68_KO | 0.4 | 0.701 |
| glycerol2 | -0.157 | 2.304 |
| lignocerate | 0.144 | 2.288 |
| oleate | 0.064 | 1.324 |
| phosphatidylcholine | 0.262 | 6.0 |
| acetate | 0.125 | 1.057 |
| glucAc | 0.179 | 0.245 |
| Rv0950ko | 0.793 | -1.291 |
| Rv1096ko | 1.463 | -1.846 |
| Rv3684ko | 1.009 | -0.55 |
| delta_otsA_trehalose | 0.003 | -0.497 |