Top 10 genes with highest correlation to Rv1032c/trcS:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0228/- | (cc=0.6533) | info on Rv0228/- |
| Rv1758/cut1 | (cc=0.6474) | info on Rv1758/cut1 |
| Rv1708/- | (cc=0.6361) | info on Rv1708/- |
| Rv1180/pks3 | (cc=0.606) | info on Rv1180/pks3 |
| Rv2633c/- | (cc=0.6021) | info on Rv2633c/- |
| Rv1731/gabD2 | (cc=0.6015) | info on Rv1731/gabD2 |
| Rv0359/- | (cc=0.5924) | info on Rv0359/- |
| Rv3777/- | (cc=0.5903) | info on Rv3777/- |
| Rv0089/- | (cc=0.5822) | info on Rv0089/- |
| Rv2559c/- | (cc=0.5805) | info on Rv2559c/- |
Correlation of Rv1032c/trcS with Rv1731/gabD2
Normalized LFCs for Rv1032c/trcS:
(description and provenance of datasets)
| Rv1032c/trcS | Rv1731/gabD2 | |
| Fe_supp_jason_reseq | 1.105 | 1.414 |
| low_pH_jason_reseq | -0.03 | -0.234 |
| NO_jason_reseq | 1.137 | -0.496 |
| B6_jason_reseq | 1.216 | 0.968 |
| MHCII_jason_reseq | 0.905 | 0.922 |
| Isoniazid02 | 0.697 | 2.222 |
| Rifampicin4 | -0.024 | 0.612 |
| Ethambutol3 | 0.691 | 1.846 |
| Meropenem3 | 0.374 | 0.787 |
| Vancomycin16 | 0.021 | 0.485 |
| Rv2680_day32 | 0.074 | -0.77 |
| H37Rv_KO_MarP | 0.652 | 0.976 |
| hypoxia_3wks | 0.112 | -0.311 |
| hypoxia_6wks | -0.311 | -0.762 |
| glycerol | -0.29 | 0.143 |
| cholesterol | -0.243 | 0.103 |
| AJ | 0.365 | -0.844 |
| Bibs02 | -0.993 | -0.906 |
| Bibs02c | -0.352 | -0.126 |
| BL6 | -0.772 | -0.135 |
| BL6a | -0.672 | -0.679 |
| BXD01 | -0.507 | -0.878 |
| BXD010 | -0.774 | -0.388 |
| BXD011 | -0.563 | -0.631 |
| BXD03 | -0.432 | -1.159 |
| BXD04 | -0.481 | -0.293 |
| BXD05 | -0.831 | -0.531 |
| BXD06 | -0.824 | -0.527 |
| BXD07 | -0.72 | -0.787 |
| BXD08 | -0.646 | -0.512 |
| BXD09 | -0.941 | -0.89 |
| CAST | -0.312 | -0.609 |
| CCcont | -0.394 | -0.868 |
| DS01 | -0.282 | -0.313 |
| DS02 | -0.695 | -0.098 |
| DS04 | 0.132 | -0.257 |
| DS0c | -0.328 | -0.456 |
| GP01 | 0.257 | -0.752 |
| GP02 | 0.309 | -1.025 |
| GP0c | -0.019 | -1.226 |
| NOD | 0.561 | -0.392 |
| NZO | -0.526 | -0.247 |
| PWK | 0.831 | 0.098 |
| H37Rv_KO_CtpC | -1.154 | -1.118 |
| H37Rv_KO_CtpD | -0.417 | -1.473 |
| H37Rv_KO_Rv1272 | -0.191 | -0.469 |
| H37Rv_KO_SugABC | -0.029 | 0.11 |
| H37Rv_KO_MbtN | -1.493 | -0.511 |
| Trans05 | -0.536 | -1.015 |
| macrophage_unactivated | -0.66 | -1.117 |
| IL1 | -0.914 | -1.272 |
| Rapamycin | -0.893 | -0.365 |
| Tcell | -1.059 | -1.153 |
| GMCSF | -0.385 | -0.481 |
| IFNab | -0.535 | -1.182 |
| IFNg | -1.109 | -0.195 |
| IFNg_GMCSF1 | -0.968 | -1.471 |
| Rv1432_day32 | -0.134 | -0.086 |
| Rv1565c_day32 | -0.28 | 0.305 |
| secA2_input | -0.363 | -0.916 |
| delta_Rv3594 | -0.095 | -0.028 |
| delta_Rv3717 | -0.413 | -0.068 |
| delta_Rv3811 | 0.036 | 0.315 |
| delta_Rv0954 | -0.82 | 1.269 |
| PonA1 | -0.043 | 0.173 |
| EccD1_KO | 0.516 | 0.355 |
| EspI_KO | 0.71 | -0.108 |
| PE35_KO | 0.169 | 0.703 |
| PPE68_KO | 0.4 | 0.771 |
| glycerol2 | -0.157 | 0.398 |
| lignocerate | 0.144 | 1.058 |
| oleate | 0.064 | -0.679 |
| phosphatidylcholine | 0.262 | 0.73 |
| acetate | 0.125 | 0.938 |
| glucAc | 0.179 | 0.898 |
| Rv0950ko | 0.793 | 0.332 |
| Rv1096ko | 1.463 | 1.062 |
| Rv3684ko | 1.009 | 0.694 |
| delta_otsA_trehalose | 0.003 | 0.492 |