Top 10 genes with highest correlation to Rv1032c/trcS:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0228/- | (cc=0.6533) | info on Rv0228/- |
| Rv1758/cut1 | (cc=0.6474) | info on Rv1758/cut1 |
| Rv1708/- | (cc=0.6361) | info on Rv1708/- |
| Rv1180/pks3 | (cc=0.606) | info on Rv1180/pks3 |
| Rv2633c/- | (cc=0.6021) | info on Rv2633c/- |
| Rv1731/gabD2 | (cc=0.6015) | info on Rv1731/gabD2 |
| Rv0359/- | (cc=0.5924) | info on Rv0359/- |
| Rv3777/- | (cc=0.5903) | info on Rv3777/- |
| Rv0089/- | (cc=0.5822) | info on Rv0089/- |
| Rv2559c/- | (cc=0.5805) | info on Rv2559c/- |
Correlation of Rv1032c/trcS with Rv2559c/-
Normalized LFCs for Rv1032c/trcS:
(description and provenance of datasets)
| Rv1032c/trcS | Rv2559c/- | |
| Fe_supp_jason_reseq | 1.105 | -0.519 |
| low_pH_jason_reseq | -0.03 | -0.89 |
| NO_jason_reseq | 1.137 | 0.604 |
| B6_jason_reseq | 1.216 | 0.393 |
| MHCII_jason_reseq | 0.905 | 0.667 |
| Isoniazid02 | 0.697 | 0.716 |
| Rifampicin4 | -0.024 | 0.523 |
| Ethambutol3 | 0.691 | 1.459 |
| Meropenem3 | 0.374 | 2.195 |
| Vancomycin16 | 0.021 | 0.164 |
| Rv2680_day32 | 0.074 | 0.089 |
| H37Rv_KO_MarP | 0.652 | 0.08 |
| hypoxia_3wks | 0.112 | 0.152 |
| hypoxia_6wks | -0.311 | -0.821 |
| glycerol | -0.29 | 0.87 |
| cholesterol | -0.243 | 0.377 |
| AJ | 0.365 | 0.422 |
| Bibs02 | -0.993 | 0.111 |
| Bibs02c | -0.352 | 0.526 |
| BL6 | -0.772 | -1.122 |
| BL6a | -0.672 | 0.066 |
| BXD01 | -0.507 | -0.79 |
| BXD010 | -0.774 | -1.132 |
| BXD011 | -0.563 | -1.012 |
| BXD03 | -0.432 | -0.714 |
| BXD04 | -0.481 | -0.855 |
| BXD05 | -0.831 | -1.037 |
| BXD06 | -0.824 | -1.094 |
| BXD07 | -0.72 | -1.28 |
| BXD08 | -0.646 | -0.538 |
| BXD09 | -0.941 | -1.17 |
| CAST | -0.312 | 0.419 |
| CCcont | -0.394 | -0.875 |
| DS01 | -0.282 | 0.746 |
| DS02 | -0.695 | 0.777 |
| DS04 | 0.132 | -0.689 |
| DS0c | -0.328 | 0.096 |
| GP01 | 0.257 | 0.117 |
| GP02 | 0.309 | 0.413 |
| GP0c | -0.019 | -0.06 |
| NOD | 0.561 | 0.682 |
| NZO | -0.526 | 0.688 |
| PWK | 0.831 | 0.119 |
| H37Rv_KO_CtpC | -1.154 | -0.477 |
| H37Rv_KO_CtpD | -0.417 | 0.699 |
| H37Rv_KO_Rv1272 | -0.191 | -0.301 |
| H37Rv_KO_SugABC | -0.029 | 0.185 |
| H37Rv_KO_MbtN | -1.493 | -1.121 |
| Trans05 | -0.536 | -0.496 |
| macrophage_unactivated | -0.66 | -1.61 |
| IL1 | -0.914 | -0.946 |
| Rapamycin | -0.893 | -1.614 |
| Tcell | -1.059 | -0.57 |
| GMCSF | -0.385 | -1.304 |
| IFNab | -0.535 | -1.091 |
| IFNg | -1.109 | -1.16 |
| IFNg_GMCSF1 | -0.968 | -1.178 |
| Rv1432_day32 | -0.134 | -1.0 |
| Rv1565c_day32 | -0.28 | 0.486 |
| secA2_input | -0.363 | -0.085 |
| delta_Rv3594 | -0.095 | -0.545 |
| delta_Rv3717 | -0.413 | -0.575 |
| delta_Rv3811 | 0.036 | -0.494 |
| delta_Rv0954 | -0.82 | -0.367 |
| PonA1 | -0.043 | 0.355 |
| EccD1_KO | 0.516 | 0.904 |
| EspI_KO | 0.71 | 0.194 |
| PE35_KO | 0.169 | 0.744 |
| PPE68_KO | 0.4 | 1.03 |
| glycerol2 | -0.157 | -0.184 |
| lignocerate | 0.144 | -0.47 |
| oleate | 0.064 | -0.072 |
| phosphatidylcholine | 0.262 | -0.345 |
| acetate | 0.125 | -0.409 |
| glucAc | 0.179 | -0.285 |
| Rv0950ko | 0.793 | 0.543 |
| Rv1096ko | 1.463 | 0.573 |
| Rv3684ko | 1.009 | 0.717 |
| delta_otsA_trehalose | 0.003 | 1.64 |