Top 10 genes with highest correlation to Rv1032c/trcS:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0228/- | (cc=0.6533) | info on Rv0228/- |
| Rv1758/cut1 | (cc=0.6474) | info on Rv1758/cut1 |
| Rv1708/- | (cc=0.6361) | info on Rv1708/- |
| Rv1180/pks3 | (cc=0.606) | info on Rv1180/pks3 |
| Rv2633c/- | (cc=0.6021) | info on Rv2633c/- |
| Rv1731/gabD2 | (cc=0.6015) | info on Rv1731/gabD2 |
| Rv0359/- | (cc=0.5924) | info on Rv0359/- |
| Rv3777/- | (cc=0.5903) | info on Rv3777/- |
| Rv0089/- | (cc=0.5822) | info on Rv0089/- |
| Rv2559c/- | (cc=0.5805) | info on Rv2559c/- |
Correlation of Rv1032c/trcS with Rv1180/pks3
Normalized LFCs for Rv1032c/trcS:
(description and provenance of datasets)
| Rv1032c/trcS | Rv1180/pks3 | |
| Fe_supp_jason_reseq | 1.105 | -0.279 |
| low_pH_jason_reseq | -0.03 | 2.652 |
| NO_jason_reseq | 1.137 | 0.0 |
| B6_jason_reseq | 1.216 | 2.843 |
| MHCII_jason_reseq | 0.905 | 3.318 |
| Isoniazid02 | 0.697 | -0.345 |
| Rifampicin4 | -0.024 | -0.374 |
| Ethambutol3 | 0.691 | 0.176 |
| Meropenem3 | 0.374 | -0.865 |
| Vancomycin16 | 0.021 | 0.225 |
| Rv2680_day32 | 0.074 | -0.493 |
| H37Rv_KO_MarP | 0.652 | 0.415 |
| hypoxia_3wks | 0.112 | -0.319 |
| hypoxia_6wks | -0.311 | 0.234 |
| glycerol | -0.29 | -0.016 |
| cholesterol | -0.243 | 0.163 |
| AJ | 0.365 | 0.356 |
| Bibs02 | -0.993 | -0.254 |
| Bibs02c | -0.352 | 0.646 |
| BL6 | -0.772 | -2.892 |
| BL6a | -0.672 | -0.405 |
| BXD01 | -0.507 | -2.644 |
| BXD010 | -0.774 | -1.603 |
| BXD011 | -0.563 | -2.421 |
| BXD03 | -0.432 | -1.964 |
| BXD04 | -0.481 | -1.702 |
| BXD05 | -0.831 | -1.519 |
| BXD06 | -0.824 | -2.271 |
| BXD07 | -0.72 | -2.302 |
| BXD08 | -0.646 | -2.404 |
| BXD09 | -0.941 | -2.206 |
| CAST | -0.312 | 0.307 |
| CCcont | -0.394 | -2.242 |
| DS01 | -0.282 | 0.371 |
| DS02 | -0.695 | 0.298 |
| DS04 | 0.132 | 0.292 |
| DS0c | -0.328 | 0.093 |
| GP01 | 0.257 | -1.877 |
| GP02 | 0.309 | -1.623 |
| GP0c | -0.019 | -3.264 |
| NOD | 0.561 | -0.194 |
| NZO | -0.526 | 0.069 |
| PWK | 0.831 | 0.374 |
| H37Rv_KO_CtpC | -1.154 | -1.492 |
| H37Rv_KO_CtpD | -0.417 | -2.799 |
| H37Rv_KO_Rv1272 | -0.191 | -2.581 |
| H37Rv_KO_SugABC | -0.029 | -1.747 |
| H37Rv_KO_MbtN | -1.493 | -1.345 |
| Trans05 | -0.536 | -1.761 |
| macrophage_unactivated | -0.66 | -3.27 |
| IL1 | -0.914 | -2.174 |
| Rapamycin | -0.893 | -1.534 |
| Tcell | -1.059 | -3.454 |
| GMCSF | -0.385 | -2.609 |
| IFNab | -0.535 | -2.276 |
| IFNg | -1.109 | -3.175 |
| IFNg_GMCSF1 | -0.968 | -1.518 |
| Rv1432_day32 | -0.134 | 0.411 |
| Rv1565c_day32 | -0.28 | 0.692 |
| secA2_input | -0.363 | 0.944 |
| delta_Rv3594 | -0.095 | 0.2 |
| delta_Rv3717 | -0.413 | -1.016 |
| delta_Rv3811 | 0.036 | -1.142 |
| delta_Rv0954 | -0.82 | -1.262 |
| PonA1 | -0.043 | 0.077 |
| EccD1_KO | 0.516 | 1.457 |
| EspI_KO | 0.71 | -0.106 |
| PE35_KO | 0.169 | 0.694 |
| PPE68_KO | 0.4 | 0.557 |
| glycerol2 | -0.157 | -0.684 |
| lignocerate | 0.144 | 0.737 |
| oleate | 0.064 | -0.489 |
| phosphatidylcholine | 0.262 | -0.066 |
| acetate | 0.125 | -0.299 |
| glucAc | 0.179 | -0.016 |
| Rv0950ko | 0.793 | 1.227 |
| Rv1096ko | 1.463 | 0.826 |
| Rv3684ko | 1.009 | 0.419 |
| delta_otsA_trehalose | 0.003 | 0.724 |