Top 10 genes with highest correlation to Rv1032c/trcS:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0228/- | (cc=0.6533) | info on Rv0228/- |
| Rv1758/cut1 | (cc=0.6474) | info on Rv1758/cut1 |
| Rv1708/- | (cc=0.6361) | info on Rv1708/- |
| Rv1180/pks3 | (cc=0.606) | info on Rv1180/pks3 |
| Rv2633c/- | (cc=0.6021) | info on Rv2633c/- |
| Rv1731/gabD2 | (cc=0.6015) | info on Rv1731/gabD2 |
| Rv0359/- | (cc=0.5924) | info on Rv0359/- |
| Rv3777/- | (cc=0.5903) | info on Rv3777/- |
| Rv0089/- | (cc=0.5822) | info on Rv0089/- |
| Rv2559c/- | (cc=0.5805) | info on Rv2559c/- |
Correlation of Rv1032c/trcS with Rv0228/-
Normalized LFCs for Rv1032c/trcS:
(description and provenance of datasets)
| Rv1032c/trcS | Rv0228/- | |
| Fe_supp_jason_reseq | 1.105 | 1.07 |
| low_pH_jason_reseq | -0.03 | 0.0 |
| NO_jason_reseq | 1.137 | 0.0 |
| B6_jason_reseq | 1.216 | 1.759 |
| MHCII_jason_reseq | 0.905 | 0.37 |
| Isoniazid02 | 0.697 | -0.167 |
| Rifampicin4 | -0.024 | 0.558 |
| Ethambutol3 | 0.691 | -0.14 |
| Meropenem3 | 0.374 | 0.128 |
| Vancomycin16 | 0.021 | 0.796 |
| Rv2680_day32 | 0.074 | 0.0 |
| H37Rv_KO_MarP | 0.652 | -0.684 |
| hypoxia_3wks | 0.112 | 0.678 |
| hypoxia_6wks | -0.311 | -0.626 |
| glycerol | -0.29 | 0.585 |
| cholesterol | -0.243 | 0.915 |
| AJ | 0.365 | 0.05 |
| Bibs02 | -0.993 | 0.56 |
| Bibs02c | -0.352 | -1.66 |
| BL6 | -0.772 | -2.023 |
| BL6a | -0.672 | -2.66 |
| BXD01 | -0.507 | -2.107 |
| BXD010 | -0.774 | -2.072 |
| BXD011 | -0.563 | -2.06 |
| BXD03 | -0.432 | -2.187 |
| BXD04 | -0.481 | -2.0 |
| BXD05 | -0.831 | -2.177 |
| BXD06 | -0.824 | -2.159 |
| BXD07 | -0.72 | -2.24 |
| BXD08 | -0.646 | -2.151 |
| BXD09 | -0.941 | -2.273 |
| CAST | -0.312 | -0.389 |
| CCcont | -0.394 | -2.131 |
| DS01 | -0.282 | -0.727 |
| DS02 | -0.695 | -1.942 |
| DS04 | 0.132 | 0.779 |
| DS0c | -0.328 | -1.431 |
| GP01 | 0.257 | -1.597 |
| GP02 | 0.309 | -1.346 |
| GP0c | -0.019 | -2.103 |
| NOD | 0.561 | -0.83 |
| NZO | -0.526 | -0.285 |
| PWK | 0.831 | 0.168 |
| H37Rv_KO_CtpC | -1.154 | -2.628 |
| H37Rv_KO_CtpD | -0.417 | -1.922 |
| H37Rv_KO_Rv1272 | -0.191 | -2.281 |
| H37Rv_KO_SugABC | -0.029 | -1.503 |
| H37Rv_KO_MbtN | -1.493 | -1.667 |
| Trans05 | -0.536 | -1.983 |
| macrophage_unactivated | -0.66 | -2.923 |
| IL1 | -0.914 | -2.747 |
| Rapamycin | -0.893 | -2.842 |
| Tcell | -1.059 | -3.017 |
| GMCSF | -0.385 | -2.445 |
| IFNab | -0.535 | -2.799 |
| IFNg | -1.109 | -2.475 |
| IFNg_GMCSF1 | -0.968 | -1.386 |
| Rv1432_day32 | -0.134 | 0.0 |
| Rv1565c_day32 | -0.28 | 0.0 |
| secA2_input | -0.363 | 1.565 |
| delta_Rv3594 | -0.095 | 0.402 |
| delta_Rv3717 | -0.413 | 0.0 |
| delta_Rv3811 | 0.036 | 0.205 |
| delta_Rv0954 | -0.82 | 0.0 |
| PonA1 | -0.043 | 0.0 |
| EccD1_KO | 0.516 | -0.865 |
| EspI_KO | 0.71 | -0.359 |
| PE35_KO | 0.169 | -0.368 |
| PPE68_KO | 0.4 | -0.841 |
| glycerol2 | -0.157 | 0.0 |
| lignocerate | 0.144 | 0.591 |
| oleate | 0.064 | 0.0 |
| phosphatidylcholine | 0.262 | 0.193 |
| acetate | 0.125 | 0.0 |
| glucAc | 0.179 | 0.0 |
| Rv0950ko | 0.793 | 0.793 |
| Rv1096ko | 1.463 | 1.143 |
| Rv3684ko | 1.009 | 0.452 |
| delta_otsA_trehalose | 0.003 | 0.0 |