Top 10 genes with highest correlation to Rv0970/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0301/vapC2 | (cc=0.4223) | info on Rv0301/vapC2 |
| Rv3683/- | (cc=0.4098) | info on Rv3683/- |
| Rv3912/- | (cc=0.4087) | info on Rv3912/- |
| Rv2734/- | (cc=0.4037) | info on Rv2734/- |
| Rv1164/narI | (cc=0.3962) | info on Rv1164/narI |
| Rv1435c/- | (cc=0.3839) | info on Rv1435c/- |
| Rv2568c/- | (cc=0.3709) | info on Rv2568c/- |
| Rv2873/mpt83 | (cc=0.3615) | info on Rv2873/mpt83 |
| Rv2529/- | (cc=0.3591) | info on Rv2529/- |
| Rv1759c/wag22 | (cc=0.3566) | info on Rv1759c/wag22 |
Correlation of Rv0970/- with Rv2734/-
Normalized LFCs for Rv0970/-:
(description and provenance of datasets)
| Rv0970/- | Rv2734/- | |
| Fe_supp_jason_reseq | 0.017 | 1.563 |
| low_pH_jason_reseq | -0.462 | 0.157 |
| NO_jason_reseq | 0.407 | 0.906 |
| B6_jason_reseq | -0.723 | -0.363 |
| MHCII_jason_reseq | -0.935 | -1.422 |
| Isoniazid02 | -0.383 | 1.097 |
| Rifampicin4 | -0.712 | -0.948 |
| Ethambutol3 | 0.738 | 0.79 |
| Meropenem3 | 1.487 | 1.155 |
| Vancomycin16 | -0.663 | -0.48 |
| Rv2680_day32 | 0.402 | -0.068 |
| H37Rv_KO_MarP | 0.237 | -0.305 |
| hypoxia_3wks | 0.291 | -0.849 |
| hypoxia_6wks | -0.938 | -1.201 |
| glycerol | -0.519 | 0.534 |
| cholesterol | 0.585 | 0.588 |
| AJ | 0.437 | -1.807 |
| Bibs02 | 0.332 | -0.791 |
| Bibs02c | -0.094 | -1.479 |
| BL6 | -0.22 | -0.14 |
| BL6a | 0.409 | 0.168 |
| BXD01 | -0.373 | 0.153 |
| BXD010 | 0.555 | 1.157 |
| BXD011 | 0.784 | 0.742 |
| BXD03 | -0.03 | 0.115 |
| BXD04 | -0.391 | 0.0 |
| BXD05 | 0.15 | 0.609 |
| BXD06 | 0.421 | 0.278 |
| BXD07 | -0.256 | 0.862 |
| BXD08 | 0.306 | -0.23 |
| BXD09 | -0.471 | 0.41 |
| CAST | 0.18 | -1.326 |
| CCcont | -0.289 | 0.711 |
| DS01 | -0.457 | -0.724 |
| DS02 | -0.2 | -1.06 |
| DS04 | -0.711 | -0.594 |
| DS0c | 1.053 | 0.22 |
| GP01 | 1.114 | 0.595 |
| GP02 | 0.568 | -0.061 |
| GP0c | 0.337 | 0.633 |
| NOD | -0.687 | -1.364 |
| NZO | -0.266 | -1.276 |
| PWK | 0.308 | -0.601 |
| H37Rv_KO_CtpC | 0.255 | -0.747 |
| H37Rv_KO_CtpD | -0.057 | 1.199 |
| H37Rv_KO_Rv1272 | 0.366 | 0.918 |
| H37Rv_KO_SugABC | 0.969 | 0.872 |
| H37Rv_KO_MbtN | 0.066 | 0.662 |
| Trans05 | 1.066 | 0.416 |
| macrophage_unactivated | -0.06 | 0.407 |
| IL1 | 0.027 | 0.383 |
| Rapamycin | -0.206 | 0.058 |
| Tcell | 0.15 | 0.244 |
| GMCSF | -0.074 | -0.05 |
| IFNab | 0.193 | 1.787 |
| IFNg | 0.468 | 0.66 |
| IFNg_GMCSF1 | 0.525 | 0.569 |
| Rv1432_day32 | -0.966 | -0.87 |
| Rv1565c_day32 | -1.21 | -1.693 |
| secA2_input | 0.182 | 0.142 |
| delta_Rv3594 | -0.265 | -0.08 |
| delta_Rv3717 | -0.345 | -0.357 |
| delta_Rv3811 | -0.369 | -0.7 |
| delta_Rv0954 | 0.121 | -0.319 |
| PonA1 | -0.271 | -0.611 |
| EccD1_KO | 0.089 | 0.138 |
| EspI_KO | -0.385 | 0.091 |
| PE35_KO | -0.277 | -0.26 |
| PPE68_KO | -0.211 | 0.0 |
| glycerol2 | -0.527 | -1.841 |
| lignocerate | 0.106 | -1.93 |
| oleate | 0.043 | -1.589 |
| phosphatidylcholine | -0.13 | -2.364 |
| acetate | 0.098 | -1.014 |
| glucAc | 1.209 | -0.482 |
| Rv0950ko | 0.76 | -0.081 |
| Rv1096ko | 0.461 | -0.311 |
| Rv3684ko | 0.904 | 0.452 |
| delta_otsA_trehalose | 0.0 | 1.091 |