Top 10 genes with highest correlation to Rv0970/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0301/vapC2 | (cc=0.4223) | info on Rv0301/vapC2 |
| Rv3683/- | (cc=0.4098) | info on Rv3683/- |
| Rv3912/- | (cc=0.4087) | info on Rv3912/- |
| Rv2734/- | (cc=0.4037) | info on Rv2734/- |
| Rv1164/narI | (cc=0.3962) | info on Rv1164/narI |
| Rv1435c/- | (cc=0.3839) | info on Rv1435c/- |
| Rv2568c/- | (cc=0.3709) | info on Rv2568c/- |
| Rv2873/mpt83 | (cc=0.3615) | info on Rv2873/mpt83 |
| Rv2529/- | (cc=0.3591) | info on Rv2529/- |
| Rv1759c/wag22 | (cc=0.3566) | info on Rv1759c/wag22 |
Correlation of Rv0970/- with Rv1759c/wag22
Normalized LFCs for Rv0970/-:
(description and provenance of datasets)
| Rv0970/- | Rv1759c/wag22 | |
| Fe_supp_jason_reseq | 0.017 | -0.185 |
| low_pH_jason_reseq | -0.462 | -1.042 |
| NO_jason_reseq | 0.407 | 0.0 |
| B6_jason_reseq | -0.723 | -0.568 |
| MHCII_jason_reseq | -0.935 | 0.071 |
| Isoniazid02 | -0.383 | -0.023 |
| Rifampicin4 | -0.712 | 0.699 |
| Ethambutol3 | 0.738 | 1.244 |
| Meropenem3 | 1.487 | 0.43 |
| Vancomycin16 | -0.663 | -0.215 |
| Rv2680_day32 | 0.402 | -0.453 |
| H37Rv_KO_MarP | 0.237 | -0.717 |
| hypoxia_3wks | 0.291 | 0.14 |
| hypoxia_6wks | -0.938 | -0.841 |
| glycerol | -0.519 | 1.129 |
| cholesterol | 0.585 | 0.459 |
| AJ | 0.437 | 0.903 |
| Bibs02 | 0.332 | 0.952 |
| Bibs02c | -0.094 | 0.922 |
| BL6 | -0.22 | -0.571 |
| BL6a | 0.409 | 0.261 |
| BXD01 | -0.373 | -0.316 |
| BXD010 | 0.555 | -0.559 |
| BXD011 | 0.784 | -0.372 |
| BXD03 | -0.03 | -0.018 |
| BXD04 | -0.391 | -0.383 |
| BXD05 | 0.15 | -0.243 |
| BXD06 | 0.421 | -0.22 |
| BXD07 | -0.256 | -0.148 |
| BXD08 | 0.306 | -0.506 |
| BXD09 | -0.471 | -0.534 |
| CAST | 0.18 | 0.028 |
| CCcont | -0.289 | -0.902 |
| DS01 | -0.457 | -0.69 |
| DS02 | -0.2 | -0.328 |
| DS04 | -0.711 | 0.188 |
| DS0c | 1.053 | -0.864 |
| GP01 | 1.114 | 1.171 |
| GP02 | 0.568 | 1.513 |
| GP0c | 0.337 | 1.142 |
| NOD | -0.687 | -0.695 |
| NZO | -0.266 | -0.186 |
| PWK | 0.308 | 0.19 |
| H37Rv_KO_CtpC | 0.255 | -0.064 |
| H37Rv_KO_CtpD | -0.057 | 0.708 |
| H37Rv_KO_Rv1272 | 0.366 | -0.018 |
| H37Rv_KO_SugABC | 0.969 | -0.621 |
| H37Rv_KO_MbtN | 0.066 | 0.192 |
| Trans05 | 1.066 | 1.066 |
| macrophage_unactivated | -0.06 | -0.672 |
| IL1 | 0.027 | 0.825 |
| Rapamycin | -0.206 | 0.163 |
| Tcell | 0.15 | -0.629 |
| GMCSF | -0.074 | 1.349 |
| IFNab | 0.193 | -1.113 |
| IFNg | 0.468 | -0.299 |
| IFNg_GMCSF1 | 0.525 | 0.584 |
| Rv1432_day32 | -0.966 | 0.194 |
| Rv1565c_day32 | -1.21 | -1.019 |
| secA2_input | 0.182 | -0.133 |
| delta_Rv3594 | -0.265 | -0.33 |
| delta_Rv3717 | -0.345 | -0.448 |
| delta_Rv3811 | -0.369 | -0.372 |
| delta_Rv0954 | 0.121 | -0.168 |
| PonA1 | -0.271 | 0.075 |
| EccD1_KO | 0.089 | 0.839 |
| EspI_KO | -0.385 | 0.163 |
| PE35_KO | -0.277 | 0.295 |
| PPE68_KO | -0.211 | 0.218 |
| glycerol2 | -0.527 | -0.443 |
| lignocerate | 0.106 | -0.424 |
| oleate | 0.043 | 0.208 |
| phosphatidylcholine | -0.13 | 0.172 |
| acetate | 0.098 | 0.603 |
| glucAc | 1.209 | 1.46 |
| Rv0950ko | 0.76 | 0.57 |
| Rv1096ko | 0.461 | 0.986 |
| Rv3684ko | 0.904 | 0.164 |
| delta_otsA_trehalose | 0.0 | -0.66 |