Top 10 genes with highest correlation to Rv0944/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2833c/ugpB | (cc=0.4935) | info on Rv2833c/ugpB |
| Rv3528c/- | (cc=0.4688) | info on Rv3528c/- |
| Rv3576/lppH | (cc=0.4545) | info on Rv3576/lppH |
| Rv0480c/- | (cc=0.4318) | info on Rv0480c/- |
| Rv0927c/- | (cc=0.3999) | info on Rv0927c/- |
| Rv1473A/- | (cc=0.3975) | info on Rv1473A/- |
| Rv2161c/- | (cc=0.3939) | info on Rv2161c/- |
| Rv0055/rpsR1 | (cc=0.3927) | info on Rv0055/rpsR1 |
| Rv2668/- | (cc=0.3777) | info on Rv2668/- |
| Rv3123/- | (cc=0.3772) | info on Rv3123/- |
Correlation of Rv0944/- with Rv2668/-
Normalized LFCs for Rv0944/-:
(description and provenance of datasets)
| Rv0944/- | Rv2668/- | |
| Fe_supp_jason_reseq | -0.706 | -1.182 |
| low_pH_jason_reseq | -0.811 | -0.391 |
| NO_jason_reseq | 0.475 | 0.076 |
| B6_jason_reseq | -0.843 | -0.461 |
| MHCII_jason_reseq | 1.757 | -1.006 |
| Isoniazid02 | 0.474 | 0.349 |
| Rifampicin4 | 1.11 | 0.804 |
| Ethambutol3 | 0.564 | 0.773 |
| Meropenem3 | 0.779 | -0.295 |
| Vancomycin16 | 1.231 | 0.788 |
| Rv2680_day32 | -0.351 | -1.115 |
| H37Rv_KO_MarP | 0.368 | 0.127 |
| hypoxia_3wks | -0.73 | -0.231 |
| hypoxia_6wks | 0.445 | -0.428 |
| glycerol | 1.185 | 1.096 |
| cholesterol | 0.465 | -1.433 |
| AJ | 1.081 | 0.182 |
| Bibs02 | 0.387 | -0.119 |
| Bibs02c | 0.483 | -1.234 |
| BL6 | 1.849 | 0.61 |
| BL6a | 1.253 | -0.11 |
| BXD01 | 1.82 | -0.44 |
| BXD010 | 0.101 | -0.62 |
| BXD011 | 0.398 | 0.141 |
| BXD03 | 1.526 | 0.193 |
| BXD04 | 1.187 | -0.057 |
| BXD05 | -0.337 | 0.57 |
| BXD06 | 0.967 | -0.087 |
| BXD07 | 0.686 | -0.103 |
| BXD08 | 1.104 | 0.221 |
| BXD09 | 0.814 | 0.074 |
| CAST | -0.511 | -1.587 |
| CCcont | 1.548 | 0.77 |
| DS01 | 0.082 | -1.11 |
| DS02 | 0.66 | 0.882 |
| DS04 | 0.689 | 0.135 |
| DS0c | 0.31 | -0.336 |
| GP01 | 0.099 | -2.044 |
| GP02 | 0.223 | -1.017 |
| GP0c | -1.839 | -0.767 |
| NOD | -0.192 | -0.703 |
| NZO | -0.787 | -1.445 |
| PWK | -0.297 | -0.787 |
| H37Rv_KO_CtpC | 1.567 | -0.548 |
| H37Rv_KO_CtpD | -1.485 | -2.086 |
| H37Rv_KO_Rv1272 | 1.079 | -0.234 |
| H37Rv_KO_SugABC | 0.718 | -1.183 |
| H37Rv_KO_MbtN | -1.136 | -0.675 |
| Trans05 | 1.133 | -0.834 |
| macrophage_unactivated | 0.978 | -0.129 |
| IL1 | 0.119 | -1.498 |
| Rapamycin | 0.092 | -3.069 |
| Tcell | 1.193 | 3.982 |
| GMCSF | 0.333 | -4.399 |
| IFNab | -0.593 | -4.577 |
| IFNg | 0.238 | -4.22 |
| IFNg_GMCSF1 | -0.955 | -5.442 |
| Rv1432_day32 | -1.027 | -1.156 |
| Rv1565c_day32 | -1.164 | -1.93 |
| secA2_input | 0.119 | 0.64 |
| delta_Rv3594 | 0.347 | -0.572 |
| delta_Rv3717 | -0.995 | -1.062 |
| delta_Rv3811 | -0.665 | -0.242 |
| delta_Rv0954 | 0.43 | 0.213 |
| PonA1 | -0.675 | -0.357 |
| EccD1_KO | -0.73 | 1.036 |
| EspI_KO | 0.781 | 0.034 |
| PE35_KO | 0.995 | -0.607 |
| PPE68_KO | 0.214 | -0.49 |
| glycerol2 | -0.02 | -1.093 |
| lignocerate | 0.701 | 0.6 |
| oleate | -0.601 | -1.038 |
| phosphatidylcholine | 0.525 | -0.101 |
| acetate | 0.121 | 0.464 |
| glucAc | 0.547 | 0.571 |
| Rv0950ko | 0.458 | -0.305 |
| Rv1096ko | 0.875 | 1.641 |
| Rv3684ko | 1.431 | 0.599 |
| delta_otsA_trehalose | -1.777 | 0.815 |