Top 10 genes with highest correlation to Rv0944/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2833c/ugpB | (cc=0.4935) | info on Rv2833c/ugpB |
| Rv3528c/- | (cc=0.4688) | info on Rv3528c/- |
| Rv3576/lppH | (cc=0.4545) | info on Rv3576/lppH |
| Rv0480c/- | (cc=0.4318) | info on Rv0480c/- |
| Rv0927c/- | (cc=0.3999) | info on Rv0927c/- |
| Rv1473A/- | (cc=0.3975) | info on Rv1473A/- |
| Rv2161c/- | (cc=0.3939) | info on Rv2161c/- |
| Rv0055/rpsR1 | (cc=0.3927) | info on Rv0055/rpsR1 |
| Rv2668/- | (cc=0.3777) | info on Rv2668/- |
| Rv3123/- | (cc=0.3772) | info on Rv3123/- |
Correlation of Rv0944/- with Rv0055/rpsR1
Normalized LFCs for Rv0944/-:
(description and provenance of datasets)
| Rv0944/- | Rv0055/rpsR1 | |
| Fe_supp_jason_reseq | -0.706 | -1.37 |
| low_pH_jason_reseq | -0.811 | 3.369 |
| NO_jason_reseq | 0.475 | 2.57 |
| B6_jason_reseq | -0.843 | -0.657 |
| MHCII_jason_reseq | 1.757 | 1.143 |
| Isoniazid02 | 0.474 | 2.663 |
| Rifampicin4 | 1.11 | 0.902 |
| Ethambutol3 | 0.564 | -0.441 |
| Meropenem3 | 0.779 | 0.763 |
| Vancomycin16 | 1.231 | -0.294 |
| Rv2680_day32 | -0.351 | 0.109 |
| H37Rv_KO_MarP | 0.368 | -1.325 |
| hypoxia_3wks | -0.73 | -0.678 |
| hypoxia_6wks | 0.445 | 0.084 |
| glycerol | 1.185 | 0.97 |
| cholesterol | 0.465 | -0.276 |
| AJ | 1.081 | 0.983 |
| Bibs02 | 0.387 | 0.0 |
| Bibs02c | 0.483 | 0.336 |
| BL6 | 1.849 | 3.526 |
| BL6a | 1.253 | 3.297 |
| BXD01 | 1.82 | 5.013 |
| BXD010 | 0.101 | 4.197 |
| BXD011 | 0.398 | 5.786 |
| BXD03 | 1.526 | 3.889 |
| BXD04 | 1.187 | 6.0 |
| BXD05 | -0.337 | 4.896 |
| BXD06 | 0.967 | 4.527 |
| BXD07 | 0.686 | 4.203 |
| BXD08 | 1.104 | 5.838 |
| BXD09 | 0.814 | 4.442 |
| CAST | -0.511 | 3.287 |
| CCcont | 1.548 | 3.633 |
| DS01 | 0.082 | 1.381 |
| DS02 | 0.66 | 0.181 |
| DS04 | 0.689 | -0.177 |
| DS0c | 0.31 | 0.0 |
| GP01 | 0.099 | -0.188 |
| GP02 | 0.223 | 0.0 |
| GP0c | -1.839 | -0.248 |
| NOD | -0.192 | 3.817 |
| NZO | -0.787 | -0.182 |
| PWK | -0.297 | 3.083 |
| H37Rv_KO_CtpC | 1.567 | 1.611 |
| H37Rv_KO_CtpD | -1.485 | 1.594 |
| H37Rv_KO_Rv1272 | 1.079 | 2.661 |
| H37Rv_KO_SugABC | 0.718 | -0.189 |
| H37Rv_KO_MbtN | -1.136 | 1.153 |
| Trans05 | 1.133 | 3.074 |
| macrophage_unactivated | 0.978 | 0.0 |
| IL1 | 0.119 | -0.54 |
| Rapamycin | 0.092 | -0.077 |
| Tcell | 1.193 | 1.717 |
| GMCSF | 0.333 | -1.677 |
| IFNab | -0.593 | -0.076 |
| IFNg | 0.238 | -1.31 |
| IFNg_GMCSF1 | -0.955 | -2.916 |
| Rv1432_day32 | -1.027 | 0.0 |
| Rv1565c_day32 | -1.164 | -0.415 |
| secA2_input | 0.119 | 0.997 |
| delta_Rv3594 | 0.347 | -0.812 |
| delta_Rv3717 | -0.995 | -4.252 |
| delta_Rv3811 | -0.665 | -0.106 |
| delta_Rv0954 | 0.43 | -4.366 |
| PonA1 | -0.675 | -1.721 |
| EccD1_KO | -0.73 | -2.578 |
| EspI_KO | 0.781 | 0.0 |
| PE35_KO | 0.995 | 0.134 |
| PPE68_KO | 0.214 | 0.941 |
| glycerol2 | -0.02 | 2.948 |
| lignocerate | 0.701 | 3.955 |
| oleate | -0.601 | -1.418 |
| phosphatidylcholine | 0.525 | 3.751 |
| acetate | 0.121 | 4.357 |
| glucAc | 0.547 | 3.813 |
| Rv0950ko | 0.458 | -0.944 |
| Rv1096ko | 0.875 | -1.08 |
| Rv3684ko | 1.431 | 2.391 |
| delta_otsA_trehalose | -1.777 | 0.0 |