Top 10 genes with highest correlation to Rv0313/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0483/lprQ | (cc=0.4575) | info on Rv0483/lprQ |
| Rv0307c/- | (cc=0.4547) | info on Rv0307c/- |
| Rv2203/- | (cc=0.4315) | info on Rv2203/- |
| Rv2171/lppM | (cc=0.4255) | info on Rv2171/lppM |
| Rv1825/- | (cc=0.4215) | info on Rv1825/- |
| Rv0009/ppiA | (cc=0.4181) | info on Rv0009/ppiA |
| Rv1824/- | (cc=0.409) | info on Rv1824/- |
| Rv2358/smtB | (cc=0.385) | info on Rv2358/smtB |
| Rv3682/ponA2 | (cc=0.3832) | info on Rv3682/ponA2 |
| Rv3891c/esxD | (cc=0.3754) | info on Rv3891c/esxD |
Correlation of Rv0313/- with Rv2358/smtB
Normalized LFCs for Rv0313/-:
(description and provenance of datasets)
| Rv0313/- | Rv2358/smtB | |
| Fe_supp_jason_reseq | 2.764 | 4.366 |
| low_pH_jason_reseq | -0.134 | -0.345 |
| NO_jason_reseq | -0.669 | 0.244 |
| B6_jason_reseq | 0.998 | 0.881 |
| MHCII_jason_reseq | 1.373 | 1.234 |
| Isoniazid02 | -0.109 | -1.033 |
| Rifampicin4 | -0.468 | -0.222 |
| Ethambutol3 | 0.049 | 1.063 |
| Meropenem3 | -0.105 | 1.174 |
| Vancomycin16 | -0.557 | 0.207 |
| Rv2680_day32 | 0.801 | -3.094 |
| H37Rv_KO_MarP | 1.216 | -0.715 |
| hypoxia_3wks | 0.0 | -0.295 |
| hypoxia_6wks | 0.132 | -0.672 |
| glycerol | 1.311 | 0.108 |
| cholesterol | 0.054 | -1.407 |
| AJ | -0.301 | -1.439 |
| Bibs02 | -1.282 | -0.8 |
| Bibs02c | 1.047 | 1.335 |
| BL6 | 0.508 | -1.745 |
| BL6a | 1.512 | 1.462 |
| BXD01 | 0.444 | -1.569 |
| BXD010 | -0.173 | -1.787 |
| BXD011 | -0.012 | -1.535 |
| BXD03 | -0.367 | -1.887 |
| BXD04 | -0.16 | -1.602 |
| BXD05 | 0.658 | -0.903 |
| BXD06 | 0.12 | -1.496 |
| BXD07 | 0.685 | -1.252 |
| BXD08 | 0.574 | -1.723 |
| BXD09 | 0.553 | -1.467 |
| CAST | -0.876 | -2.775 |
| CCcont | 1.244 | 0.837 |
| DS01 | 0.773 | -1.239 |
| DS02 | 0.269 | -1.827 |
| DS04 | -0.074 | -0.11 |
| DS0c | 1.647 | 0.383 |
| GP01 | -0.092 | -0.83 |
| GP02 | 0.082 | -1.078 |
| GP0c | 0.26 | 0.136 |
| NOD | -0.809 | -2.909 |
| NZO | 0.136 | -2.235 |
| PWK | -0.813 | -1.421 |
| H37Rv_KO_CtpC | 0.498 | -1.365 |
| H37Rv_KO_CtpD | -0.406 | -0.989 |
| H37Rv_KO_Rv1272 | 0.702 | -1.827 |
| H37Rv_KO_SugABC | 1.48 | 0.027 |
| H37Rv_KO_MbtN | -0.311 | 0.703 |
| Trans05 | 1.331 | -1.464 |
| macrophage_unactivated | 0.455 | -1.43 |
| IL1 | -0.386 | -2.076 |
| Rapamycin | 0.178 | -1.39 |
| Tcell | 0.984 | -1.004 |
| GMCSF | 1.164 | -2.944 |
| IFNab | 0.807 | -1.853 |
| IFNg | 0.321 | -0.644 |
| IFNg_GMCSF1 | -0.503 | -1.926 |
| Rv1432_day32 | -0.93 | -3.952 |
| Rv1565c_day32 | 1.646 | -0.794 |
| secA2_input | -0.2 | 2.339 |
| delta_Rv3594 | 0.081 | -1.557 |
| delta_Rv3717 | -0.975 | 0.237 |
| delta_Rv3811 | -0.173 | -1.808 |
| delta_Rv0954 | -0.319 | -0.173 |
| PonA1 | 0.562 | 0.816 |
| EccD1_KO | 0.536 | -1.648 |
| EspI_KO | 0.548 | -1.899 |
| PE35_KO | 0.493 | 0.828 |
| PPE68_KO | 0.851 | 0.384 |
| glycerol2 | 0.486 | 0.0 |
| lignocerate | 0.202 | 0.0 |
| oleate | 0.19 | 0.0 |
| phosphatidylcholine | 0.382 | 0.193 |
| acetate | 0.519 | 0.0 |
| glucAc | 0.496 | 0.0 |
| Rv0950ko | 1.17 | 0.476 |
| Rv1096ko | 0.612 | -0.347 |
| Rv3684ko | 0.904 | 0.0 |
| delta_otsA_trehalose | 0.631 | -0.597 |