Top 10 genes with highest correlation to Rv0313/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0483/lprQ | (cc=0.4575) | info on Rv0483/lprQ |
| Rv0307c/- | (cc=0.4547) | info on Rv0307c/- |
| Rv2203/- | (cc=0.4315) | info on Rv2203/- |
| Rv2171/lppM | (cc=0.4255) | info on Rv2171/lppM |
| Rv1825/- | (cc=0.4215) | info on Rv1825/- |
| Rv0009/ppiA | (cc=0.4181) | info on Rv0009/ppiA |
| Rv1824/- | (cc=0.409) | info on Rv1824/- |
| Rv2358/smtB | (cc=0.385) | info on Rv2358/smtB |
| Rv3682/ponA2 | (cc=0.3832) | info on Rv3682/ponA2 |
| Rv3891c/esxD | (cc=0.3754) | info on Rv3891c/esxD |
Correlation of Rv0313/- with Rv0009/ppiA
Normalized LFCs for Rv0313/-:
(description and provenance of datasets)
| Rv0313/- | Rv0009/ppiA | |
| Fe_supp_jason_reseq | 2.764 | 2.183 |
| low_pH_jason_reseq | -0.134 | 1.482 |
| NO_jason_reseq | -0.669 | -1.145 |
| B6_jason_reseq | 0.998 | -0.977 |
| MHCII_jason_reseq | 1.373 | 1.123 |
| Isoniazid02 | -0.109 | -1.94 |
| Rifampicin4 | -0.468 | -1.806 |
| Ethambutol3 | 0.049 | -0.899 |
| Meropenem3 | -0.105 | -2.463 |
| Vancomycin16 | -0.557 | -1.769 |
| Rv2680_day32 | 0.801 | 0.114 |
| H37Rv_KO_MarP | 1.216 | 0.627 |
| hypoxia_3wks | 0.0 | -3.712 |
| hypoxia_6wks | 0.132 | -2.481 |
| glycerol | 1.311 | 0.75 |
| cholesterol | 0.054 | -0.364 |
| AJ | -0.301 | -0.903 |
| Bibs02 | -1.282 | -3.559 |
| Bibs02c | 1.047 | 0.608 |
| BL6 | 0.508 | -1.083 |
| BL6a | 1.512 | 0.514 |
| BXD01 | 0.444 | -0.669 |
| BXD010 | -0.173 | -1.607 |
| BXD011 | -0.012 | -0.553 |
| BXD03 | -0.367 | -1.202 |
| BXD04 | -0.16 | -1.071 |
| BXD05 | 0.658 | -1.366 |
| BXD06 | 0.12 | -0.6 |
| BXD07 | 0.685 | -0.228 |
| BXD08 | 0.574 | 0.436 |
| BXD09 | 0.553 | -1.152 |
| CAST | -0.876 | -0.796 |
| CCcont | 1.244 | 1.533 |
| DS01 | 0.773 | -1.335 |
| DS02 | 0.269 | 0.211 |
| DS04 | -0.074 | -0.996 |
| DS0c | 1.647 | 0.528 |
| GP01 | -0.092 | -1.593 |
| GP02 | 0.082 | -0.562 |
| GP0c | 0.26 | -0.23 |
| NOD | -0.809 | 0.319 |
| NZO | 0.136 | -0.376 |
| PWK | -0.813 | -0.678 |
| H37Rv_KO_CtpC | 0.498 | 0.726 |
| H37Rv_KO_CtpD | -0.406 | 0.298 |
| H37Rv_KO_Rv1272 | 0.702 | -0.487 |
| H37Rv_KO_SugABC | 1.48 | -1.697 |
| H37Rv_KO_MbtN | -0.311 | -0.582 |
| Trans05 | 1.331 | -1.362 |
| macrophage_unactivated | 0.455 | -1.903 |
| IL1 | -0.386 | -0.611 |
| Rapamycin | 0.178 | 1.384 |
| Tcell | 0.984 | -0.857 |
| GMCSF | 1.164 | -0.771 |
| IFNab | 0.807 | -1.454 |
| IFNg | 0.321 | -1.152 |
| IFNg_GMCSF1 | -0.503 | -1.672 |
| Rv1432_day32 | -0.93 | -0.456 |
| Rv1565c_day32 | 1.646 | -1.306 |
| secA2_input | -0.2 | 1.454 |
| delta_Rv3594 | 0.081 | -1.955 |
| delta_Rv3717 | -0.975 | -3.272 |
| delta_Rv3811 | -0.173 | -2.347 |
| delta_Rv0954 | -0.319 | 0.243 |
| PonA1 | 0.562 | -0.508 |
| EccD1_KO | 0.536 | -1.171 |
| EspI_KO | 0.548 | 0.428 |
| PE35_KO | 0.493 | -0.26 |
| PPE68_KO | 0.851 | -0.259 |
| glycerol2 | 0.486 | 1.639 |
| lignocerate | 0.202 | 0.598 |
| oleate | 0.19 | -1.602 |
| phosphatidylcholine | 0.382 | 0.559 |
| acetate | 0.519 | 1.774 |
| glucAc | 0.496 | 1.265 |
| Rv0950ko | 1.17 | -0.296 |
| Rv1096ko | 0.612 | 0.32 |
| Rv3684ko | 0.904 | 0.74 |
| delta_otsA_trehalose | 0.631 | 0.626 |