Top 10 genes with highest correlation to Rv0313/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0483/lprQ | (cc=0.4575) | info on Rv0483/lprQ |
| Rv0307c/- | (cc=0.4547) | info on Rv0307c/- |
| Rv2203/- | (cc=0.4315) | info on Rv2203/- |
| Rv2171/lppM | (cc=0.4255) | info on Rv2171/lppM |
| Rv1825/- | (cc=0.4215) | info on Rv1825/- |
| Rv0009/ppiA | (cc=0.4181) | info on Rv0009/ppiA |
| Rv1824/- | (cc=0.409) | info on Rv1824/- |
| Rv2358/smtB | (cc=0.385) | info on Rv2358/smtB |
| Rv3682/ponA2 | (cc=0.3832) | info on Rv3682/ponA2 |
| Rv3891c/esxD | (cc=0.3754) | info on Rv3891c/esxD |
Correlation of Rv0313/- with Rv2171/lppM
Normalized LFCs for Rv0313/-:
(description and provenance of datasets)
| Rv0313/- | Rv2171/lppM | |
| Fe_supp_jason_reseq | 2.764 | 2.969 |
| low_pH_jason_reseq | -0.134 | 1.103 |
| NO_jason_reseq | -0.669 | -0.651 |
| B6_jason_reseq | 0.998 | -0.178 |
| MHCII_jason_reseq | 1.373 | 1.917 |
| Isoniazid02 | -0.109 | -0.131 |
| Rifampicin4 | -0.468 | -6.0 |
| Ethambutol3 | 0.049 | -0.418 |
| Meropenem3 | -0.105 | -2.504 |
| Vancomycin16 | -0.557 | -4.383 |
| Rv2680_day32 | 0.801 | -0.521 |
| H37Rv_KO_MarP | 1.216 | 3.329 |
| hypoxia_3wks | 0.0 | -1.826 |
| hypoxia_6wks | 0.132 | -3.339 |
| glycerol | 1.311 | 0.328 |
| cholesterol | 0.054 | -0.58 |
| AJ | -0.301 | 0.022 |
| Bibs02 | -1.282 | 0.554 |
| Bibs02c | 1.047 | 1.999 |
| BL6 | 0.508 | -1.778 |
| BL6a | 1.512 | 0.976 |
| BXD01 | 0.444 | -1.761 |
| BXD010 | -0.173 | -2.895 |
| BXD011 | -0.012 | -0.736 |
| BXD03 | -0.367 | -1.74 |
| BXD04 | -0.16 | -2.61 |
| BXD05 | 0.658 | -1.264 |
| BXD06 | 0.12 | -2.913 |
| BXD07 | 0.685 | -1.738 |
| BXD08 | 0.574 | -2.407 |
| BXD09 | 0.553 | -1.385 |
| CAST | -0.876 | -3.192 |
| CCcont | 1.244 | 0.591 |
| DS01 | 0.773 | -0.376 |
| DS02 | 0.269 | -0.931 |
| DS04 | -0.074 | -3.318 |
| DS0c | 1.647 | 0.789 |
| GP01 | -0.092 | -0.743 |
| GP02 | 0.082 | -0.782 |
| GP0c | 0.26 | -1.411 |
| NOD | -0.809 | -1.822 |
| NZO | 0.136 | -0.451 |
| PWK | -0.813 | -3.355 |
| H37Rv_KO_CtpC | 0.498 | -0.386 |
| H37Rv_KO_CtpD | -0.406 | 0.858 |
| H37Rv_KO_Rv1272 | 0.702 | -0.351 |
| H37Rv_KO_SugABC | 1.48 | -2.024 |
| H37Rv_KO_MbtN | -0.311 | -0.968 |
| Trans05 | 1.331 | -0.654 |
| macrophage_unactivated | 0.455 | 0.537 |
| IL1 | -0.386 | 0.638 |
| Rapamycin | 0.178 | 2.099 |
| Tcell | 0.984 | -1.352 |
| GMCSF | 1.164 | 0.264 |
| IFNab | 0.807 | 1.769 |
| IFNg | 0.321 | 0.575 |
| IFNg_GMCSF1 | -0.503 | 0.16 |
| Rv1432_day32 | -0.93 | -2.021 |
| Rv1565c_day32 | 1.646 | 4.546 |
| secA2_input | -0.2 | -0.585 |
| delta_Rv3594 | 0.081 | 1.34 |
| delta_Rv3717 | -0.975 | -0.349 |
| delta_Rv3811 | -0.173 | 1.185 |
| delta_Rv0954 | -0.319 | 1.981 |
| PonA1 | 0.562 | -3.884 |
| EccD1_KO | 0.536 | -1.618 |
| EspI_KO | 0.548 | -0.61 |
| PE35_KO | 0.493 | -0.645 |
| PPE68_KO | 0.851 | -0.086 |
| glycerol2 | 0.486 | -1.321 |
| lignocerate | 0.202 | -1.072 |
| oleate | 0.19 | -1.941 |
| phosphatidylcholine | 0.382 | -0.808 |
| acetate | 0.519 | -0.279 |
| glucAc | 0.496 | -0.879 |
| Rv0950ko | 1.17 | -0.621 |
| Rv1096ko | 0.612 | -1.288 |
| Rv3684ko | 0.904 | 0.049 |
| delta_otsA_trehalose | 0.631 | 2.633 |