Top 10 genes with highest correlation to Rv0313/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0483/lprQ | (cc=0.4575) | info on Rv0483/lprQ |
| Rv0307c/- | (cc=0.4547) | info on Rv0307c/- |
| Rv2203/- | (cc=0.4315) | info on Rv2203/- |
| Rv2171/lppM | (cc=0.4255) | info on Rv2171/lppM |
| Rv1825/- | (cc=0.4215) | info on Rv1825/- |
| Rv0009/ppiA | (cc=0.4181) | info on Rv0009/ppiA |
| Rv1824/- | (cc=0.409) | info on Rv1824/- |
| Rv2358/smtB | (cc=0.385) | info on Rv2358/smtB |
| Rv3682/ponA2 | (cc=0.3832) | info on Rv3682/ponA2 |
| Rv3891c/esxD | (cc=0.3754) | info on Rv3891c/esxD |
Correlation of Rv0313/- with Rv1824/-
Normalized LFCs for Rv0313/-:
(description and provenance of datasets)
| Rv0313/- | Rv1824/- | |
| Fe_supp_jason_reseq | 2.764 | 2.671 |
| low_pH_jason_reseq | -0.134 | 1.377 |
| NO_jason_reseq | -0.669 | 0.788 |
| B6_jason_reseq | 0.998 | 0.607 |
| MHCII_jason_reseq | 1.373 | 1.132 |
| Isoniazid02 | -0.109 | -0.274 |
| Rifampicin4 | -0.468 | -2.185 |
| Ethambutol3 | 0.049 | -1.366 |
| Meropenem3 | -0.105 | -1.095 |
| Vancomycin16 | -0.557 | -3.526 |
| Rv2680_day32 | 0.801 | -0.131 |
| H37Rv_KO_MarP | 1.216 | 6.0 |
| hypoxia_3wks | 0.0 | -2.269 |
| hypoxia_6wks | 0.132 | -2.827 |
| glycerol | 1.311 | 0.341 |
| cholesterol | 0.054 | -1.129 |
| AJ | -0.301 | -2.403 |
| Bibs02 | -1.282 | -1.191 |
| Bibs02c | 1.047 | -0.876 |
| BL6 | 0.508 | -1.45 |
| BL6a | 1.512 | -0.96 |
| BXD01 | 0.444 | -2.453 |
| BXD010 | -0.173 | -2.913 |
| BXD011 | -0.012 | -1.859 |
| BXD03 | -0.367 | -2.84 |
| BXD04 | -0.16 | -2.813 |
| BXD05 | 0.658 | -2.723 |
| BXD06 | 0.12 | -2.803 |
| BXD07 | 0.685 | -2.359 |
| BXD08 | 0.574 | -3.158 |
| BXD09 | 0.553 | -2.394 |
| CAST | -0.876 | -3.924 |
| CCcont | 1.244 | 1.168 |
| DS01 | 0.773 | -2.897 |
| DS02 | 0.269 | -2.521 |
| DS04 | -0.074 | -0.94 |
| DS0c | 1.647 | -0.247 |
| GP01 | -0.092 | -2.073 |
| GP02 | 0.082 | -1.976 |
| GP0c | 0.26 | -2.84 |
| NOD | -0.809 | -3.279 |
| NZO | 0.136 | -2.744 |
| PWK | -0.813 | -3.969 |
| H37Rv_KO_CtpC | 0.498 | -1.026 |
| H37Rv_KO_CtpD | -0.406 | -1.35 |
| H37Rv_KO_Rv1272 | 0.702 | 0.225 |
| H37Rv_KO_SugABC | 1.48 | -2.163 |
| H37Rv_KO_MbtN | -0.311 | -1.756 |
| Trans05 | 1.331 | 0.121 |
| macrophage_unactivated | 0.455 | 0.129 |
| IL1 | -0.386 | -0.519 |
| Rapamycin | 0.178 | 0.7 |
| Tcell | 0.984 | -0.277 |
| GMCSF | 1.164 | -1.769 |
| IFNab | 0.807 | -1.645 |
| IFNg | 0.321 | -1.147 |
| IFNg_GMCSF1 | -0.503 | -2.105 |
| Rv1432_day32 | -0.93 | -2.726 |
| Rv1565c_day32 | 1.646 | 0.49 |
| secA2_input | -0.2 | 1.509 |
| delta_Rv3594 | 0.081 | 1.576 |
| delta_Rv3717 | -0.975 | -0.522 |
| delta_Rv3811 | -0.173 | 0.311 |
| delta_Rv0954 | -0.319 | -0.699 |
| PonA1 | 0.562 | 0.211 |
| EccD1_KO | 0.536 | 0.678 |
| EspI_KO | 0.548 | 0.0 |
| PE35_KO | 0.493 | 2.438 |
| PPE68_KO | 0.851 | 1.801 |
| glycerol2 | 0.486 | -4.161 |
| lignocerate | 0.202 | -1.458 |
| oleate | 0.19 | -5.464 |
| phosphatidylcholine | 0.382 | -0.416 |
| acetate | 0.519 | 0.625 |
| glucAc | 0.496 | 0.656 |
| Rv0950ko | 1.17 | -0.344 |
| Rv1096ko | 0.612 | -3.308 |
| Rv3684ko | 0.904 | -1.159 |
| delta_otsA_trehalose | 0.631 | -0.329 |