Top 10 genes with highest correlation to Rv0100/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0097/- | (cc=0.7997) | info on Rv0097/- |
| Rv0101/nrp | (cc=0.7481) | info on Rv0101/nrp |
| Rv0099/fadD10 | (cc=0.6974) | info on Rv0099/fadD10 |
| Rv2069/sigC | (cc=0.6773) | info on Rv2069/sigC |
| Rv1109c/- | (cc=0.6523) | info on Rv1109c/- |
| Rv3868/eccA1 | (cc=0.6477) | info on Rv3868/eccA1 |
| Rv0096/PPE1 | (cc=0.6389) | info on Rv0096/PPE1 |
| Rv0098/fcoT | (cc=0.6354) | info on Rv0098/fcoT |
| Rv1235/lpqY | (cc=0.6155) | info on Rv1235/lpqY |
| Rv1405c/- | (cc=0.6128) | info on Rv1405c/- |
Correlation of Rv0100/- with Rv2069/sigC
Normalized LFCs for Rv0100/-:
(description and provenance of datasets)
| Rv0100/- | Rv2069/sigC | |
| Fe_supp_jason_reseq | -1.157 | -0.128 |
| low_pH_jason_reseq | 0.35 | -0.119 |
| NO_jason_reseq | 0.116 | 0.462 |
| B6_jason_reseq | -2.098 | -2.033 |
| MHCII_jason_reseq | -3.594 | -3.645 |
| Isoniazid02 | 0.471 | -0.362 |
| Rifampicin4 | -0.788 | 0.309 |
| Ethambutol3 | -0.143 | -0.439 |
| Meropenem3 | 0.225 | -1.061 |
| Vancomycin16 | 0.698 | -0.47 |
| Rv2680_day32 | -2.779 | -2.541 |
| H37Rv_KO_MarP | -0.075 | -0.037 |
| hypoxia_3wks | 0.662 | -0.455 |
| hypoxia_6wks | -0.43 | -0.576 |
| glycerol | -0.085 | -0.085 |
| cholesterol | -0.963 | 0.617 |
| AJ | -5.057 | -5.946 |
| Bibs02 | -1.788 | -2.356 |
| Bibs02c | -1.234 | -0.18 |
| BL6 | -2.369 | -1.445 |
| BL6a | -0.591 | -1.238 |
| BXD01 | 0.07 | -1.302 |
| BXD010 | -0.177 | -1.236 |
| BXD011 | 0.163 | -1.081 |
| BXD03 | 0.766 | -1.843 |
| BXD04 | 0.041 | 0.16 |
| BXD05 | -0.93 | -1.081 |
| BXD06 | -1.533 | -2.687 |
| BXD07 | -0.63 | -1.013 |
| BXD08 | 1.03 | -1.029 |
| BXD09 | -0.952 | -1.683 |
| CAST | -4.897 | -5.119 |
| CCcont | -1.134 | 0.587 |
| DS01 | -0.77 | -1.305 |
| DS02 | 0.608 | 1.936 |
| DS04 | -4.455 | -2.282 |
| DS0c | -1.906 | -1.199 |
| GP01 | -1.681 | -1.777 |
| GP02 | -2.372 | -2.008 |
| GP0c | -0.633 | -0.301 |
| NOD | -4.553 | -3.642 |
| NZO | -5.306 | -5.46 |
| PWK | -4.628 | -4.735 |
| H37Rv_KO_CtpC | -0.739 | -1.144 |
| H37Rv_KO_CtpD | 0.185 | -0.641 |
| H37Rv_KO_Rv1272 | -0.627 | -0.508 |
| H37Rv_KO_SugABC | -2.275 | 0.098 |
| H37Rv_KO_MbtN | -0.201 | 0.242 |
| Trans05 | -0.938 | -0.834 |
| macrophage_unactivated | 1.54 | 1.657 |
| IL1 | -1.109 | -2.251 |
| Rapamycin | -0.249 | -1.697 |
| Tcell | 1.15 | -1.03 |
| GMCSF | -0.628 | 0.826 |
| IFNab | 1.212 | 3.217 |
| IFNg | -0.171 | 1.791 |
| IFNg_GMCSF1 | -0.635 | -0.666 |
| Rv1432_day32 | -4.427 | -3.819 |
| Rv1565c_day32 | -3.532 | -2.045 |
| secA2_input | -0.385 | -0.069 |
| delta_Rv3594 | -1.621 | -0.558 |
| delta_Rv3717 | -1.655 | 0.039 |
| delta_Rv3811 | -0.589 | -0.167 |
| delta_Rv0954 | -1.932 | 0.088 |
| PonA1 | -3.653 | -4.903 |
| EccD1_KO | -0.145 | 0.174 |
| EspI_KO | 0.254 | 0.319 |
| PE35_KO | -0.21 | 0.782 |
| PPE68_KO | -0.4 | 0.627 |
| glycerol2 | 0.198 | -3.511 |
| lignocerate | -1.262 | 1.103 |
| oleate | 0.449 | -2.823 |
| phosphatidylcholine | -0.465 | 0.182 |
| acetate | -1.234 | 0.258 |
| glucAc | -3.631 | 0.669 |
| Rv0950ko | 1.393 | -0.069 |
| Rv1096ko | 0.796 | -0.682 |
| Rv3684ko | 1.411 | -0.858 |
| delta_otsA_trehalose | 0.192 | 1.348 |