Top 10 genes with highest correlation to Rv0100/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0097/- | (cc=0.7997) | info on Rv0097/- |
| Rv0101/nrp | (cc=0.7481) | info on Rv0101/nrp |
| Rv0099/fadD10 | (cc=0.6974) | info on Rv0099/fadD10 |
| Rv2069/sigC | (cc=0.6773) | info on Rv2069/sigC |
| Rv1109c/- | (cc=0.6523) | info on Rv1109c/- |
| Rv3868/eccA1 | (cc=0.6477) | info on Rv3868/eccA1 |
| Rv0096/PPE1 | (cc=0.6389) | info on Rv0096/PPE1 |
| Rv0098/fcoT | (cc=0.6354) | info on Rv0098/fcoT |
| Rv1235/lpqY | (cc=0.6155) | info on Rv1235/lpqY |
| Rv1405c/- | (cc=0.6128) | info on Rv1405c/- |
Correlation of Rv0100/- with Rv0101/nrp
Normalized LFCs for Rv0100/-:
(description and provenance of datasets)
| Rv0100/- | Rv0101/nrp | |
| Fe_supp_jason_reseq | -1.157 | -0.475 |
| low_pH_jason_reseq | 0.35 | 0.0 |
| NO_jason_reseq | 0.116 | 0.037 |
| B6_jason_reseq | -2.098 | -1.33 |
| MHCII_jason_reseq | -3.594 | -2.431 |
| Isoniazid02 | 0.471 | 0.493 |
| Rifampicin4 | -0.788 | -0.319 |
| Ethambutol3 | -0.143 | 0.604 |
| Meropenem3 | 0.225 | 0.788 |
| Vancomycin16 | 0.698 | -0.154 |
| Rv2680_day32 | -2.779 | -2.166 |
| H37Rv_KO_MarP | -0.075 | 0.257 |
| hypoxia_3wks | 0.662 | 0.06 |
| hypoxia_6wks | -0.43 | 0.0 |
| glycerol | -0.085 | -0.037 |
| cholesterol | -0.963 | 1.361 |
| AJ | -5.057 | -3.82 |
| Bibs02 | -1.788 | -1.358 |
| Bibs02c | -1.234 | -0.732 |
| BL6 | -2.369 | -1.049 |
| BL6a | -0.591 | -1.621 |
| BXD01 | 0.07 | -1.449 |
| BXD010 | -0.177 | -0.882 |
| BXD011 | 0.163 | -1.018 |
| BXD03 | 0.766 | -0.908 |
| BXD04 | 0.041 | -1.14 |
| BXD05 | -0.93 | -0.904 |
| BXD06 | -1.533 | -1.934 |
| BXD07 | -0.63 | -1.08 |
| BXD08 | 1.03 | -0.433 |
| BXD09 | -0.952 | -1.564 |
| CAST | -4.897 | -3.177 |
| CCcont | -1.134 | -0.599 |
| DS01 | -0.77 | 0.337 |
| DS02 | 0.608 | 1.878 |
| DS04 | -4.455 | -1.789 |
| DS0c | -1.906 | -0.226 |
| GP01 | -1.681 | -1.073 |
| GP02 | -2.372 | -1.148 |
| GP0c | -0.633 | -0.149 |
| NOD | -4.553 | -2.023 |
| NZO | -5.306 | -3.664 |
| PWK | -4.628 | -3.066 |
| H37Rv_KO_CtpC | -0.739 | -1.607 |
| H37Rv_KO_CtpD | 0.185 | -0.196 |
| H37Rv_KO_Rv1272 | -0.627 | -0.643 |
| H37Rv_KO_SugABC | -2.275 | 0.527 |
| H37Rv_KO_MbtN | -0.201 | 0.485 |
| Trans05 | -0.938 | -0.73 |
| macrophage_unactivated | 1.54 | 0.786 |
| IL1 | -1.109 | -0.653 |
| Rapamycin | -0.249 | -0.325 |
| Tcell | 1.15 | -0.228 |
| GMCSF | -0.628 | 0.911 |
| IFNab | 1.212 | 1.394 |
| IFNg | -0.171 | 0.219 |
| IFNg_GMCSF1 | -0.635 | 0.408 |
| Rv1432_day32 | -4.427 | -2.588 |
| Rv1565c_day32 | -3.532 | -3.349 |
| secA2_input | -0.385 | 0.348 |
| delta_Rv3594 | -1.621 | -0.257 |
| delta_Rv3717 | -1.655 | -0.045 |
| delta_Rv3811 | -0.589 | 0.152 |
| delta_Rv0954 | -1.932 | 0.152 |
| PonA1 | -3.653 | -1.675 |
| EccD1_KO | -0.145 | -0.132 |
| EspI_KO | 0.254 | -0.188 |
| PE35_KO | -0.21 | -0.155 |
| PPE68_KO | -0.4 | -0.211 |
| glycerol2 | 0.198 | 0.052 |
| lignocerate | -1.262 | -0.222 |
| oleate | 0.449 | -0.352 |
| phosphatidylcholine | -0.465 | -0.286 |
| acetate | -1.234 | -0.032 |
| glucAc | -3.631 | -0.02 |
| Rv0950ko | 1.393 | -0.096 |
| Rv1096ko | 0.796 | 1.028 |
| Rv3684ko | 1.411 | 0.403 |
| delta_otsA_trehalose | 0.192 | 0.119 |