Top 10 genes with highest correlation to Rv0100/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0097/- | (cc=0.7997) | info on Rv0097/- |
| Rv0101/nrp | (cc=0.7481) | info on Rv0101/nrp |
| Rv0099/fadD10 | (cc=0.6974) | info on Rv0099/fadD10 |
| Rv2069/sigC | (cc=0.6773) | info on Rv2069/sigC |
| Rv1109c/- | (cc=0.6523) | info on Rv1109c/- |
| Rv3868/eccA1 | (cc=0.6477) | info on Rv3868/eccA1 |
| Rv0096/PPE1 | (cc=0.6389) | info on Rv0096/PPE1 |
| Rv0098/fcoT | (cc=0.6354) | info on Rv0098/fcoT |
| Rv1235/lpqY | (cc=0.6155) | info on Rv1235/lpqY |
| Rv1405c/- | (cc=0.6128) | info on Rv1405c/- |
Correlation of Rv0100/- with Rv1235/lpqY
Normalized LFCs for Rv0100/-:
(description and provenance of datasets)
| Rv0100/- | Rv1235/lpqY | |
| Fe_supp_jason_reseq | -1.157 | -0.923 |
| low_pH_jason_reseq | 0.35 | -0.507 |
| NO_jason_reseq | 0.116 | -0.034 |
| B6_jason_reseq | -2.098 | -1.41 |
| MHCII_jason_reseq | -3.594 | -2.564 |
| Isoniazid02 | 0.471 | -1.036 |
| Rifampicin4 | -0.788 | 0.609 |
| Ethambutol3 | -0.143 | 0.051 |
| Meropenem3 | 0.225 | -1.357 |
| Vancomycin16 | 0.698 | 0.164 |
| Rv2680_day32 | -2.779 | -2.577 |
| H37Rv_KO_MarP | -0.075 | 0.835 |
| hypoxia_3wks | 0.662 | 0.471 |
| hypoxia_6wks | -0.43 | 0.716 |
| glycerol | -0.085 | -0.418 |
| cholesterol | -0.963 | -0.035 |
| AJ | -5.057 | -2.262 |
| Bibs02 | -1.788 | -1.576 |
| Bibs02c | -1.234 | -1.175 |
| BL6 | -2.369 | -1.827 |
| BL6a | -0.591 | -1.458 |
| BXD01 | 0.07 | -1.842 |
| BXD010 | -0.177 | -1.369 |
| BXD011 | 0.163 | -1.801 |
| BXD03 | 0.766 | -2.182 |
| BXD04 | 0.041 | -0.292 |
| BXD05 | -0.93 | -2.172 |
| BXD06 | -1.533 | -1.664 |
| BXD07 | -0.63 | -1.392 |
| BXD08 | 1.03 | -1.658 |
| BXD09 | -0.952 | -1.647 |
| CAST | -4.897 | -3.717 |
| CCcont | -1.134 | -0.331 |
| DS01 | -0.77 | -1.576 |
| DS02 | 0.608 | -1.994 |
| DS04 | -4.455 | -2.927 |
| DS0c | -1.906 | -1.648 |
| GP01 | -1.681 | -1.089 |
| GP02 | -2.372 | -1.39 |
| GP0c | -0.633 | 0.015 |
| NOD | -4.553 | -3.389 |
| NZO | -5.306 | -2.006 |
| PWK | -4.628 | -3.277 |
| H37Rv_KO_CtpC | -0.739 | -1.048 |
| H37Rv_KO_CtpD | 0.185 | -0.5 |
| H37Rv_KO_Rv1272 | -0.627 | -1.653 |
| H37Rv_KO_SugABC | -2.275 | -0.661 |
| H37Rv_KO_MbtN | -0.201 | -0.128 |
| Trans05 | -0.938 | 0.089 |
| macrophage_unactivated | 1.54 | 0.0 |
| IL1 | -1.109 | 1.1 |
| Rapamycin | -0.249 | 0.997 |
| Tcell | 1.15 | -0.244 |
| GMCSF | -0.628 | 0.826 |
| IFNab | 1.212 | 0.692 |
| IFNg | -0.171 | 0.577 |
| IFNg_GMCSF1 | -0.635 | 0.396 |
| Rv1432_day32 | -4.427 | -2.173 |
| Rv1565c_day32 | -3.532 | -1.989 |
| secA2_input | -0.385 | -0.601 |
| delta_Rv3594 | -1.621 | 0.083 |
| delta_Rv3717 | -1.655 | -0.701 |
| delta_Rv3811 | -0.589 | -0.232 |
| delta_Rv0954 | -1.932 | -0.459 |
| PonA1 | -3.653 | -0.111 |
| EccD1_KO | -0.145 | -0.27 |
| EspI_KO | 0.254 | -0.057 |
| PE35_KO | -0.21 | -0.178 |
| PPE68_KO | -0.4 | -0.474 |
| glycerol2 | 0.198 | -0.383 |
| lignocerate | -1.262 | -0.459 |
| oleate | 0.449 | 0.244 |
| phosphatidylcholine | -0.465 | 0.0 |
| acetate | -1.234 | -0.231 |
| glucAc | -3.631 | -0.412 |
| Rv0950ko | 1.393 | 0.329 |
| Rv1096ko | 0.796 | 0.63 |
| Rv3684ko | 1.411 | 0.874 |
| delta_otsA_trehalose | 0.192 | 0.0 |