Top 10 genes with highest correlation to Rv0069c/sdaA:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0338c/- | (cc=0.7502) | info on Rv0338c/- |
| Rv0320/- | (cc=0.5463) | info on Rv0320/- |
| Rv0191/- | (cc=0.4888) | info on Rv0191/- |
| Rv0373c/- | (cc=0.4568) | info on Rv0373c/- |
| Rv2189c/- | (cc=0.4479) | info on Rv2189c/- |
| Rv2715/- | (cc=0.4477) | info on Rv2715/- |
| Rv3068c/pgmA | (cc=0.4325) | info on Rv3068c/pgmA |
| Rv2394/ggtB | (cc=0.4302) | info on Rv2394/ggtB |
| Rv1317c/alkA | (cc=0.4268) | info on Rv1317c/alkA |
| Rv2073c/- | (cc=0.4251) | info on Rv2073c/- |
Correlation of Rv0069c/sdaA with Rv1317c/alkA
Normalized LFCs for Rv0069c/sdaA:
(description and provenance of datasets)
| Rv0069c/sdaA | Rv1317c/alkA | |
| Fe_supp_jason_reseq | 0.205 | -0.628 |
| low_pH_jason_reseq | -1.367 | -1.337 |
| NO_jason_reseq | -1.265 | -0.711 |
| B6_jason_reseq | -0.208 | -0.498 |
| MHCII_jason_reseq | 0.127 | -0.365 |
| Isoniazid02 | -0.049 | 1.264 |
| Rifampicin4 | -0.233 | 0.062 |
| Ethambutol3 | 0.627 | 1.267 |
| Meropenem3 | 0.278 | 0.236 |
| Vancomycin16 | 0.836 | 0.297 |
| Rv2680_day32 | -0.372 | 0.21 |
| H37Rv_KO_MarP | 0.217 | 0.353 |
| hypoxia_3wks | -0.319 | 0.132 |
| hypoxia_6wks | -0.299 | 0.086 |
| glycerol | 2.392 | -0.377 |
| cholesterol | 6.0 | 1.811 |
| AJ | 0.187 | -0.281 |
| Bibs02 | -0.592 | -0.342 |
| Bibs02c | 0.196 | 0.867 |
| BL6 | 0.084 | -0.792 |
| BL6a | 0.307 | 0.423 |
| BXD01 | -0.154 | -0.77 |
| BXD010 | -0.171 | -0.141 |
| BXD011 | 0.68 | -0.328 |
| BXD03 | -0.631 | -0.599 |
| BXD04 | -0.425 | -0.156 |
| BXD05 | -0.223 | -0.677 |
| BXD06 | -0.038 | 0.156 |
| BXD07 | -0.207 | -0.259 |
| BXD08 | 0.329 | 0.103 |
| BXD09 | 0.076 | -0.458 |
| CAST | -0.976 | -0.47 |
| CCcont | 0.176 | -0.973 |
| DS01 | -0.279 | -0.4 |
| DS02 | -0.325 | -0.917 |
| DS04 | -1.036 | 0.252 |
| DS0c | 0.363 | -0.127 |
| GP01 | 0.265 | -1.167 |
| GP02 | -0.138 | 0.142 |
| GP0c | 0.639 | -0.98 |
| NOD | -1.596 | -0.155 |
| NZO | -1.472 | -0.241 |
| PWK | 0.183 | 0.45 |
| H37Rv_KO_CtpC | 0.213 | -0.639 |
| H37Rv_KO_CtpD | -1.75 | -0.759 |
| H37Rv_KO_Rv1272 | -0.72 | -1.334 |
| H37Rv_KO_SugABC | 0.94 | -0.141 |
| H37Rv_KO_MbtN | 1.301 | -0.518 |
| Trans05 | -0.5 | 0.096 |
| macrophage_unactivated | 0.18 | -0.71 |
| IL1 | 0.383 | -0.332 |
| Rapamycin | 0.807 | 0.129 |
| Tcell | 0.42 | -0.313 |
| GMCSF | -0.264 | 0.222 |
| IFNab | 1.167 | -0.178 |
| IFNg | 0.249 | 0.486 |
| IFNg_GMCSF1 | -0.512 | -0.424 |
| Rv1432_day32 | 0.415 | 0.368 |
| Rv1565c_day32 | -0.355 | -0.393 |
| secA2_input | 1.656 | 0.387 |
| delta_Rv3594 | -0.783 | -0.489 |
| delta_Rv3717 | -0.2 | -0.148 |
| delta_Rv3811 | 0.299 | 0.064 |
| delta_Rv0954 | 0.399 | -0.012 |
| PonA1 | 0.943 | -0.965 |
| EccD1_KO | 0.802 | -0.105 |
| EspI_KO | -0.645 | -0.448 |
| PE35_KO | 0.055 | 0.0 |
| PPE68_KO | 0.781 | -0.179 |
| glycerol2 | 0.171 | -0.454 |
| lignocerate | 0.183 | -0.369 |
| oleate | -0.264 | -0.096 |
| phosphatidylcholine | -0.067 | -0.368 |
| acetate | -0.191 | -1.122 |
| glucAc | -0.249 | -0.605 |
| Rv0950ko | 0.582 | -0.618 |
| Rv1096ko | 0.582 | -0.118 |
| Rv3684ko | -0.069 | -0.154 |
| delta_otsA_trehalose | 0.027 | -0.113 |