Top 10 genes with highest correlation to Rv0069c/sdaA:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0338c/- | (cc=0.7502) | info on Rv0338c/- |
| Rv0320/- | (cc=0.5463) | info on Rv0320/- |
| Rv0191/- | (cc=0.4888) | info on Rv0191/- |
| Rv0373c/- | (cc=0.4568) | info on Rv0373c/- |
| Rv2189c/- | (cc=0.4479) | info on Rv2189c/- |
| Rv2715/- | (cc=0.4477) | info on Rv2715/- |
| Rv3068c/pgmA | (cc=0.4325) | info on Rv3068c/pgmA |
| Rv2394/ggtB | (cc=0.4302) | info on Rv2394/ggtB |
| Rv1317c/alkA | (cc=0.4268) | info on Rv1317c/alkA |
| Rv2073c/- | (cc=0.4251) | info on Rv2073c/- |
Correlation of Rv0069c/sdaA with Rv0320/-
Normalized LFCs for Rv0069c/sdaA:
(description and provenance of datasets)
| Rv0069c/sdaA | Rv0320/- | |
| Fe_supp_jason_reseq | 0.205 | 0.911 |
| low_pH_jason_reseq | -1.367 | -0.766 |
| NO_jason_reseq | -1.265 | -0.601 |
| B6_jason_reseq | -0.208 | 0.942 |
| MHCII_jason_reseq | 0.127 | 1.499 |
| Isoniazid02 | -0.049 | -1.008 |
| Rifampicin4 | -0.233 | 0.084 |
| Ethambutol3 | 0.627 | 0.677 |
| Meropenem3 | 0.278 | -0.791 |
| Vancomycin16 | 0.836 | -0.578 |
| Rv2680_day32 | -0.372 | -0.25 |
| H37Rv_KO_MarP | 0.217 | 0.672 |
| hypoxia_3wks | -0.319 | 0.594 |
| hypoxia_6wks | -0.299 | 0.844 |
| glycerol | 2.392 | 0.636 |
| cholesterol | 6.0 | 4.951 |
| AJ | 0.187 | 0.608 |
| Bibs02 | -0.592 | 0.29 |
| Bibs02c | 0.196 | 0.815 |
| BL6 | 0.084 | -0.906 |
| BL6a | 0.307 | -0.019 |
| BXD01 | -0.154 | -0.681 |
| BXD010 | -0.171 | -0.101 |
| BXD011 | 0.68 | 0.134 |
| BXD03 | -0.631 | 0.445 |
| BXD04 | -0.425 | 0.165 |
| BXD05 | -0.223 | -0.212 |
| BXD06 | -0.038 | -0.485 |
| BXD07 | -0.207 | -0.264 |
| BXD08 | 0.329 | -0.289 |
| BXD09 | 0.076 | -0.05 |
| CAST | -0.976 | -0.237 |
| CCcont | 0.176 | -1.11 |
| DS01 | -0.279 | 0.683 |
| DS02 | -0.325 | 0.685 |
| DS04 | -1.036 | 0.148 |
| DS0c | 0.363 | 0.481 |
| GP01 | 0.265 | -0.064 |
| GP02 | -0.138 | 0.52 |
| GP0c | 0.639 | 0.608 |
| NOD | -1.596 | -0.109 |
| NZO | -1.472 | 0.25 |
| PWK | 0.183 | 0.155 |
| H37Rv_KO_CtpC | 0.213 | -0.379 |
| H37Rv_KO_CtpD | -1.75 | 0.036 |
| H37Rv_KO_Rv1272 | -0.72 | 0.483 |
| H37Rv_KO_SugABC | 0.94 | -0.291 |
| H37Rv_KO_MbtN | 1.301 | 0.374 |
| Trans05 | -0.5 | -0.234 |
| macrophage_unactivated | 0.18 | -0.155 |
| IL1 | 0.383 | 0.243 |
| Rapamycin | 0.807 | 0.282 |
| Tcell | 0.42 | -0.339 |
| GMCSF | -0.264 | 0.269 |
| IFNab | 1.167 | 0.203 |
| IFNg | 0.249 | -0.131 |
| IFNg_GMCSF1 | -0.512 | 0.399 |
| Rv1432_day32 | 0.415 | -0.402 |
| Rv1565c_day32 | -0.355 | -0.597 |
| secA2_input | 1.656 | -0.139 |
| delta_Rv3594 | -0.783 | -0.824 |
| delta_Rv3717 | -0.2 | -0.522 |
| delta_Rv3811 | 0.299 | -0.062 |
| delta_Rv0954 | 0.399 | -0.735 |
| PonA1 | 0.943 | -0.778 |
| EccD1_KO | 0.802 | 0.148 |
| EspI_KO | -0.645 | -0.727 |
| PE35_KO | 0.055 | -0.487 |
| PPE68_KO | 0.781 | -0.461 |
| glycerol2 | 0.171 | -0.611 |
| lignocerate | 0.183 | -0.902 |
| oleate | -0.264 | -0.109 |
| phosphatidylcholine | -0.067 | -0.394 |
| acetate | -0.191 | -0.598 |
| glucAc | -0.249 | -0.687 |
| Rv0950ko | 0.582 | 0.57 |
| Rv1096ko | 0.582 | 1.01 |
| Rv3684ko | -0.069 | 0.901 |
| delta_otsA_trehalose | 0.027 | 0.469 |