Top 10 genes with highest correlation to Rv0069c/sdaA:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0338c/- | (cc=0.7502) | info on Rv0338c/- |
| Rv0320/- | (cc=0.5463) | info on Rv0320/- |
| Rv0191/- | (cc=0.4888) | info on Rv0191/- |
| Rv0373c/- | (cc=0.4568) | info on Rv0373c/- |
| Rv2189c/- | (cc=0.4479) | info on Rv2189c/- |
| Rv2715/- | (cc=0.4477) | info on Rv2715/- |
| Rv3068c/pgmA | (cc=0.4325) | info on Rv3068c/pgmA |
| Rv2394/ggtB | (cc=0.4302) | info on Rv2394/ggtB |
| Rv1317c/alkA | (cc=0.4268) | info on Rv1317c/alkA |
| Rv2073c/- | (cc=0.4251) | info on Rv2073c/- |
Correlation of Rv0069c/sdaA with Rv0191/-
Normalized LFCs for Rv0069c/sdaA:
(description and provenance of datasets)
| Rv0069c/sdaA | Rv0191/- | |
| Fe_supp_jason_reseq | 0.205 | 0.48 |
| low_pH_jason_reseq | -1.367 | -1.313 |
| NO_jason_reseq | -1.265 | -1.362 |
| B6_jason_reseq | -0.208 | -1.484 |
| MHCII_jason_reseq | 0.127 | -1.225 |
| Isoniazid02 | -0.049 | -1.029 |
| Rifampicin4 | -0.233 | -1.568 |
| Ethambutol3 | 0.627 | 1.73 |
| Meropenem3 | 0.278 | -0.769 |
| Vancomycin16 | 0.836 | 1.167 |
| Rv2680_day32 | -0.372 | -0.286 |
| H37Rv_KO_MarP | 0.217 | 0.15 |
| hypoxia_3wks | -0.319 | -1.053 |
| hypoxia_6wks | -0.299 | -1.28 |
| glycerol | 2.392 | 1.463 |
| cholesterol | 6.0 | 1.456 |
| AJ | 0.187 | -0.6 |
| Bibs02 | -0.592 | 0.457 |
| Bibs02c | 0.196 | 0.024 |
| BL6 | 0.084 | -0.386 |
| BL6a | 0.307 | -0.561 |
| BXD01 | -0.154 | -0.758 |
| BXD010 | -0.171 | -0.325 |
| BXD011 | 0.68 | -0.691 |
| BXD03 | -0.631 | -0.272 |
| BXD04 | -0.425 | -0.632 |
| BXD05 | -0.223 | -0.688 |
| BXD06 | -0.038 | -0.658 |
| BXD07 | -0.207 | -0.441 |
| BXD08 | 0.329 | -0.688 |
| BXD09 | 0.076 | -0.71 |
| CAST | -0.976 | -1.178 |
| CCcont | 0.176 | 0.227 |
| DS01 | -0.279 | -0.565 |
| DS02 | -0.325 | 0.057 |
| DS04 | -1.036 | -0.492 |
| DS0c | 0.363 | -0.57 |
| GP01 | 0.265 | -0.715 |
| GP02 | -0.138 | -0.033 |
| GP0c | 0.639 | -0.232 |
| NOD | -1.596 | -0.859 |
| NZO | -1.472 | -1.069 |
| PWK | 0.183 | -0.74 |
| H37Rv_KO_CtpC | 0.213 | -0.427 |
| H37Rv_KO_CtpD | -1.75 | 0.818 |
| H37Rv_KO_Rv1272 | -0.72 | 0.074 |
| H37Rv_KO_SugABC | 0.94 | 0.044 |
| H37Rv_KO_MbtN | 1.301 | -0.024 |
| Trans05 | -0.5 | 0.04 |
| macrophage_unactivated | 0.18 | 0.167 |
| IL1 | 0.383 | 0.11 |
| Rapamycin | 0.807 | 0.273 |
| Tcell | 0.42 | 0.205 |
| GMCSF | -0.264 | -0.071 |
| IFNab | 1.167 | 0.65 |
| IFNg | 0.249 | -0.508 |
| IFNg_GMCSF1 | -0.512 | 0.374 |
| Rv1432_day32 | 0.415 | -0.896 |
| Rv1565c_day32 | -0.355 | 0.954 |
| secA2_input | 1.656 | 1.121 |
| delta_Rv3594 | -0.783 | -0.006 |
| delta_Rv3717 | -0.2 | -0.318 |
| delta_Rv3811 | 0.299 | 0.03 |
| delta_Rv0954 | 0.399 | 0.194 |
| PonA1 | 0.943 | 0.1 |
| EccD1_KO | 0.802 | -0.546 |
| EspI_KO | -0.645 | -0.103 |
| PE35_KO | 0.055 | -0.484 |
| PPE68_KO | 0.781 | -0.518 |
| glycerol2 | 0.171 | 0.3 |
| lignocerate | 0.183 | -0.203 |
| oleate | -0.264 | -0.347 |
| phosphatidylcholine | -0.067 | -0.42 |
| acetate | -0.191 | -0.175 |
| glucAc | -0.249 | -0.391 |
| Rv0950ko | 0.582 | 0.268 |
| Rv1096ko | 0.582 | -0.262 |
| Rv3684ko | -0.069 | -0.495 |
| delta_otsA_trehalose | 0.027 | -0.195 |