Top 10 genes with highest correlation to Rv3882c/eccE1:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3870/eccCa1 | (cc=0.9587) | info on Rv3870/eccCa1 |
| Rv3869/eccB1 | (cc=0.9475) | info on Rv3869/eccB1 |
| Rv3883c/mycP1 | (cc=0.9452) | info on Rv3883c/mycP1 |
| Rv3871/eccCb1 | (cc=0.9386) | info on Rv3871/eccCb1 |
| Rv3616c/espA | (cc=0.9061) | info on Rv3616c/espA |
| Rv3615c/espC | (cc=0.9005) | info on Rv3615c/espC |
| Rv3877/eccD1 | (cc=0.8893) | info on Rv3877/eccD1 |
| Rv3614c/espD | (cc=0.8731) | info on Rv3614c/espD |
| Rv3551/- | (cc=0.8602) | info on Rv3551/- |
| Rv1568/bioA | (cc=0.8521) | info on Rv1568/bioA |
Correlation of Rv3882c/eccE1 with Rv3551/-
Normalized LFCs for Rv3882c/eccE1:
(description and provenance of datasets)
| Rv3882c/eccE1 | Rv3551/- | |
| Fe_supp_jason_reseq | -0.158 | 0.737 |
| low_pH_jason_reseq | -0.681 | -0.647 |
| NO_jason_reseq | -0.137 | -0.601 |
| B6_jason_reseq | -2.577 | -1.96 |
| MHCII_jason_reseq | -2.917 | -1.726 |
| Isoniazid02 | -0.441 | -0.842 |
| Rifampicin4 | -0.758 | -0.165 |
| Ethambutol3 | 0.265 | -1.515 |
| Meropenem3 | 0.539 | 0.734 |
| Vancomycin16 | 0.098 | -1.008 |
| Rv2680_day32 | -3.186 | -1.788 |
| H37Rv_KO_MarP | 1.198 | 0.246 |
| hypoxia_3wks | -0.439 | 0.08 |
| hypoxia_6wks | -0.052 | -0.693 |
| glycerol | 0.015 | 1.148 |
| cholesterol | -0.207 | -3.657 |
| AJ | -5.849 | -5.857 |
| Bibs02 | -6.0 | -4.616 |
| Bibs02c | -5.218 | -5.282 |
| BL6 | -2.18 | -2.92 |
| BL6a | -4.305 | -5.001 |
| BXD01 | -3.18 | -3.288 |
| BXD010 | -2.232 | -2.306 |
| BXD011 | -2.846 | -2.59 |
| BXD03 | -2.565 | -3.28 |
| BXD04 | -1.792 | -2.999 |
| BXD05 | -3.285 | -3.029 |
| BXD06 | -3.16 | -3.37 |
| BXD07 | -3.123 | -3.496 |
| BXD08 | -3.282 | -3.226 |
| BXD09 | -3.543 | -3.408 |
| CAST | -4.96 | -4.838 |
| CCcont | -0.15 | -0.733 |
| DS01 | -3.826 | -5.963 |
| DS02 | -4.684 | -5.49 |
| DS04 | -3.187 | -4.367 |
| DS0c | -4.084 | -5.476 |
| GP01 | -2.963 | -2.304 |
| GP02 | -2.747 | -1.942 |
| GP0c | -0.702 | -1.016 |
| NOD | -2.146 | -1.847 |
| NZO | -4.82 | -4.838 |
| PWK | -5.363 | -4.757 |
| H37Rv_KO_CtpC | -1.31 | -3.94 |
| H37Rv_KO_CtpD | -1.751 | -2.576 |
| H37Rv_KO_Rv1272 | -3.306 | -3.56 |
| H37Rv_KO_SugABC | -0.318 | -1.783 |
| H37Rv_KO_MbtN | 0.692 | -1.855 |
| Trans05 | -2.028 | -3.299 |
| macrophage_unactivated | -0.893 | 0.66 |
| IL1 | -0.344 | -1.605 |
| Rapamycin | -0.301 | -1.093 |
| Tcell | -2.017 | -2.209 |
| GMCSF | 0.325 | 0.752 |
| IFNab | 1.735 | 2.283 |
| IFNg | -1.748 | -0.249 |
| IFNg_GMCSF1 | -1.386 | -0.606 |
| Rv1432_day32 | -2.744 | -3.863 |
| Rv1565c_day32 | -3.434 | -3.884 |
| secA2_input | -0.357 | -0.54 |
| delta_Rv3594 | -0.121 | -0.26 |
| delta_Rv3717 | -0.067 | 0.191 |
| delta_Rv3811 | -0.074 | 0.556 |
| delta_Rv0954 | -0.023 | 1.149 |
| PonA1 | -0.279 | 0.384 |
| EccD1_KO | -0.217 | 1.246 |
| EspI_KO | -0.89 | 0.539 |
| PE35_KO | -0.633 | 1.105 |
| PPE68_KO | -0.448 | 1.139 |
| glycerol2 | 0.754 | 0.289 |
| lignocerate | 0.869 | 0.785 |
| oleate | 0.679 | -0.537 |
| phosphatidylcholine | 0.343 | -0.106 |
| acetate | -0.126 | 2.234 |
| glucAc | 0.187 | 1.052 |
| Rv0950ko | 0.416 | 1.903 |
| Rv1096ko | -0.431 | 0.329 |
| Rv3684ko | -0.576 | 0.092 |
| delta_otsA_trehalose | -1.389 | 0.325 |