Top 10 genes with highest correlation to Rv3882c/eccE1:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3870/eccCa1 | (cc=0.9587) | info on Rv3870/eccCa1 |
| Rv3869/eccB1 | (cc=0.9475) | info on Rv3869/eccB1 |
| Rv3883c/mycP1 | (cc=0.9452) | info on Rv3883c/mycP1 |
| Rv3871/eccCb1 | (cc=0.9386) | info on Rv3871/eccCb1 |
| Rv3616c/espA | (cc=0.9061) | info on Rv3616c/espA |
| Rv3615c/espC | (cc=0.9005) | info on Rv3615c/espC |
| Rv3877/eccD1 | (cc=0.8893) | info on Rv3877/eccD1 |
| Rv3614c/espD | (cc=0.8731) | info on Rv3614c/espD |
| Rv3551/- | (cc=0.8602) | info on Rv3551/- |
| Rv1568/bioA | (cc=0.8521) | info on Rv1568/bioA |
Correlation of Rv3882c/eccE1 with Rv3870/eccCa1
Normalized LFCs for Rv3882c/eccE1:
(description and provenance of datasets)
| Rv3882c/eccE1 | Rv3870/eccCa1 | |
| Fe_supp_jason_reseq | -0.158 | -1.088 |
| low_pH_jason_reseq | -0.681 | 0.325 |
| NO_jason_reseq | -0.137 | -0.291 |
| B6_jason_reseq | -2.577 | -2.875 |
| MHCII_jason_reseq | -2.917 | -3.014 |
| Isoniazid02 | -0.441 | -0.306 |
| Rifampicin4 | -0.758 | -0.888 |
| Ethambutol3 | 0.265 | -0.131 |
| Meropenem3 | 0.539 | 0.261 |
| Vancomycin16 | 0.098 | -0.215 |
| Rv2680_day32 | -3.186 | -1.924 |
| H37Rv_KO_MarP | 1.198 | 1.534 |
| hypoxia_3wks | -0.439 | -0.152 |
| hypoxia_6wks | -0.052 | 0.142 |
| glycerol | 0.015 | -0.78 |
| cholesterol | -0.207 | -0.197 |
| AJ | -5.849 | -5.284 |
| Bibs02 | -6.0 | -5.766 |
| Bibs02c | -5.218 | -4.15 |
| BL6 | -2.18 | -1.616 |
| BL6a | -4.305 | -4.402 |
| BXD01 | -3.18 | -3.251 |
| BXD010 | -2.232 | -2.846 |
| BXD011 | -2.846 | -2.901 |
| BXD03 | -2.565 | -2.571 |
| BXD04 | -1.792 | -2.748 |
| BXD05 | -3.285 | -2.789 |
| BXD06 | -3.16 | -3.586 |
| BXD07 | -3.123 | -2.661 |
| BXD08 | -3.282 | -3.816 |
| BXD09 | -3.543 | -3.836 |
| CAST | -4.96 | -4.883 |
| CCcont | -0.15 | -0.407 |
| DS01 | -3.826 | -4.356 |
| DS02 | -4.684 | -4.052 |
| DS04 | -3.187 | -2.155 |
| DS0c | -4.084 | -4.302 |
| GP01 | -2.963 | -2.367 |
| GP02 | -2.747 | -2.347 |
| GP0c | -0.702 | -0.842 |
| NOD | -2.146 | -1.925 |
| NZO | -4.82 | -5.444 |
| PWK | -5.363 | -5.533 |
| H37Rv_KO_CtpC | -1.31 | -1.66 |
| H37Rv_KO_CtpD | -1.751 | -1.651 |
| H37Rv_KO_Rv1272 | -3.306 | -1.806 |
| H37Rv_KO_SugABC | -0.318 | -0.647 |
| H37Rv_KO_MbtN | 0.692 | 0.049 |
| Trans05 | -2.028 | -1.38 |
| macrophage_unactivated | -0.893 | -0.262 |
| IL1 | -0.344 | -0.246 |
| Rapamycin | -0.301 | -0.288 |
| Tcell | -2.017 | -1.541 |
| GMCSF | 0.325 | 0.681 |
| IFNab | 1.735 | 1.859 |
| IFNg | -1.748 | -1.497 |
| IFNg_GMCSF1 | -1.386 | -1.313 |
| Rv1432_day32 | -2.744 | -2.52 |
| Rv1565c_day32 | -3.434 | -2.663 |
| secA2_input | -0.357 | 0.036 |
| delta_Rv3594 | -0.121 | 0.106 |
| delta_Rv3717 | -0.067 | -0.101 |
| delta_Rv3811 | -0.074 | -0.233 |
| delta_Rv0954 | -0.023 | 0.379 |
| PonA1 | -0.279 | 0.384 |
| EccD1_KO | -0.217 | 0.342 |
| EspI_KO | -0.89 | 0.633 |
| PE35_KO | -0.633 | 0.257 |
| PPE68_KO | -0.448 | 0.214 |
| glycerol2 | 0.754 | 0.423 |
| lignocerate | 0.869 | 0.792 |
| oleate | 0.679 | -0.193 |
| phosphatidylcholine | 0.343 | 0.531 |
| acetate | -0.126 | 0.095 |
| glucAc | 0.187 | 0.366 |
| Rv0950ko | 0.416 | 0.356 |
| Rv1096ko | -0.431 | -0.229 |
| Rv3684ko | -0.576 | 0.37 |
| delta_otsA_trehalose | -1.389 | -0.994 |