Top 10 genes with highest correlation to Rv3881c/espB:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3871/eccCb1 | (cc=0.7207) | info on Rv3871/eccCb1 |
| Rv3882c/eccE1 | (cc=0.714) | info on Rv3882c/eccE1 |
| Rv3883c/mycP1 | (cc=0.7065) | info on Rv3883c/mycP1 |
| Rv3615c/espC | (cc=0.6986) | info on Rv3615c/espC |
| Rv3869/eccB1 | (cc=0.6688) | info on Rv3869/eccB1 |
| Rv3870/eccCa1 | (cc=0.6576) | info on Rv3870/eccCa1 |
| Rv3614c/espD | (cc=0.6418) | info on Rv3614c/espD |
| Rv3616c/espA | (cc=0.6157) | info on Rv3616c/espA |
| Rv3876/espI | (cc=0.6131) | info on Rv3876/espI |
| Rv3873/PPE68 | (cc=0.5885) | info on Rv3873/PPE68 |
Correlation of Rv3881c/espB with Rv3882c/eccE1
Normalized LFCs for Rv3881c/espB:
(description and provenance of datasets)
| Rv3881c/espB | Rv3882c/eccE1 | |
| Fe_supp_jason_reseq | -0.092 | -0.158 |
| low_pH_jason_reseq | -0.293 | -0.681 |
| NO_jason_reseq | 0.05 | -0.137 |
| B6_jason_reseq | -1.408 | -2.577 |
| MHCII_jason_reseq | -1.563 | -2.917 |
| Isoniazid02 | -0.4 | -0.441 |
| Rifampicin4 | 0.192 | -0.758 |
| Ethambutol3 | 0.398 | 0.265 |
| Meropenem3 | 0.54 | 0.539 |
| Vancomycin16 | 0.13 | 0.098 |
| Rv2680_day32 | -2.032 | -3.186 |
| H37Rv_KO_MarP | 0.625 | 1.198 |
| hypoxia_3wks | 0.048 | -0.439 |
| hypoxia_6wks | -0.409 | -0.052 |
| glycerol | -0.489 | 0.015 |
| cholesterol | -0.503 | -0.207 |
| AJ | -0.783 | -5.849 |
| Bibs02 | -2.323 | -6.0 |
| Bibs02c | -1.3 | -5.218 |
| BL6 | -0.714 | -2.18 |
| BL6a | -1.421 | -4.305 |
| BXD01 | -0.981 | -3.18 |
| BXD010 | -0.276 | -2.232 |
| BXD011 | -0.817 | -2.846 |
| BXD03 | -0.643 | -2.565 |
| BXD04 | -0.802 | -1.792 |
| BXD05 | -1.416 | -3.285 |
| BXD06 | -1.43 | -3.16 |
| BXD07 | -1.6 | -3.123 |
| BXD08 | -0.954 | -3.282 |
| BXD09 | -1.248 | -3.543 |
| CAST | -0.979 | -4.96 |
| CCcont | -0.176 | -0.15 |
| DS01 | -0.436 | -3.826 |
| DS02 | -1.949 | -4.684 |
| DS04 | -0.318 | -3.187 |
| DS0c | -0.958 | -4.084 |
| GP01 | -0.588 | -2.963 |
| GP02 | -1.546 | -2.747 |
| GP0c | 0.184 | -0.702 |
| NOD | -0.617 | -2.146 |
| NZO | -0.744 | -4.82 |
| PWK | -1.692 | -5.363 |
| H37Rv_KO_CtpC | -0.446 | -1.31 |
| H37Rv_KO_CtpD | 0.0 | -1.751 |
| H37Rv_KO_Rv1272 | -0.1 | -3.306 |
| H37Rv_KO_SugABC | -0.364 | -0.318 |
| H37Rv_KO_MbtN | 0.333 | 0.692 |
| Trans05 | -0.453 | -2.028 |
| macrophage_unactivated | -0.634 | -0.893 |
| IL1 | -0.667 | -0.344 |
| Rapamycin | -0.737 | -0.301 |
| Tcell | -0.968 | -2.017 |
| GMCSF | -0.676 | 0.325 |
| IFNab | -0.447 | 1.735 |
| IFNg | -1.237 | -1.748 |
| IFNg_GMCSF1 | -1.367 | -1.386 |
| Rv1432_day32 | 0.027 | -2.744 |
| Rv1565c_day32 | -2.173 | -3.434 |
| secA2_input | -0.343 | -0.357 |
| delta_Rv3594 | -0.19 | -0.121 |
| delta_Rv3717 | -0.902 | -0.067 |
| delta_Rv3811 | -0.03 | -0.074 |
| delta_Rv0954 | -0.019 | -0.023 |
| PonA1 | -0.095 | -0.279 |
| EccD1_KO | 0.451 | -0.217 |
| EspI_KO | -0.197 | -0.89 |
| PE35_KO | -0.443 | -0.633 |
| PPE68_KO | -0.352 | -0.448 |
| glycerol2 | 1.222 | 0.754 |
| lignocerate | 0.183 | 0.869 |
| oleate | 1.038 | 0.679 |
| phosphatidylcholine | 0.0 | 0.343 |
| acetate | -0.053 | -0.126 |
| glucAc | -0.041 | 0.187 |
| Rv0950ko | 0.1 | 0.416 |
| Rv1096ko | -0.627 | -0.431 |
| Rv3684ko | -0.868 | -0.576 |
| delta_otsA_trehalose | 0.238 | -1.389 |