Top 10 genes with highest correlation to Rv3869/eccB1:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3870/eccCa1 | (cc=0.9576) | info on Rv3870/eccCa1 |
| Rv3883c/mycP1 | (cc=0.9544) | info on Rv3883c/mycP1 |
| Rv3882c/eccE1 | (cc=0.9475) | info on Rv3882c/eccE1 |
| Rv3871/eccCb1 | (cc=0.9293) | info on Rv3871/eccCb1 |
| Rv3616c/espA | (cc=0.9115) | info on Rv3616c/espA |
| Rv3614c/espD | (cc=0.8765) | info on Rv3614c/espD |
| Rv3615c/espC | (cc=0.8729) | info on Rv3615c/espC |
| Rv3877/eccD1 | (cc=0.8684) | info on Rv3877/eccD1 |
| Rv1568/bioA | (cc=0.8382) | info on Rv1568/bioA |
| Rv3551/- | (cc=0.8358) | info on Rv3551/- |
Correlation of Rv3869/eccB1 with Rv3551/-
Normalized LFCs for Rv3869/eccB1:
(description and provenance of datasets)
| Rv3869/eccB1 | Rv3551/- | |
| Fe_supp_jason_reseq | -0.595 | 0.737 |
| low_pH_jason_reseq | -1.504 | -0.647 |
| NO_jason_reseq | -0.517 | -0.601 |
| B6_jason_reseq | -3.095 | -1.96 |
| MHCII_jason_reseq | -3.051 | -1.726 |
| Isoniazid02 | 0.301 | -0.842 |
| Rifampicin4 | -0.379 | -0.165 |
| Ethambutol3 | 2.148 | -1.515 |
| Meropenem3 | 1.319 | 0.734 |
| Vancomycin16 | 0.231 | -1.008 |
| Rv2680_day32 | -2.152 | -1.788 |
| H37Rv_KO_MarP | 1.091 | 0.246 |
| hypoxia_3wks | -0.14 | 0.08 |
| hypoxia_6wks | -0.276 | -0.693 |
| glycerol | -0.376 | 1.148 |
| cholesterol | 0.317 | -3.657 |
| AJ | -5.94 | -5.857 |
| Bibs02 | -6.0 | -4.616 |
| Bibs02c | -3.504 | -5.282 |
| BL6 | -2.513 | -2.92 |
| BL6a | -3.579 | -5.001 |
| BXD01 | -3.629 | -3.288 |
| BXD010 | -3.073 | -2.306 |
| BXD011 | -3.299 | -2.59 |
| BXD03 | -3.502 | -3.28 |
| BXD04 | -2.55 | -2.999 |
| BXD05 | -3.799 | -3.029 |
| BXD06 | -3.819 | -3.37 |
| BXD07 | -3.254 | -3.496 |
| BXD08 | -3.805 | -3.226 |
| BXD09 | -4.193 | -3.408 |
| CAST | -4.92 | -4.838 |
| CCcont | -1.079 | -0.733 |
| DS01 | -4.336 | -5.963 |
| DS02 | -3.929 | -5.49 |
| DS04 | -2.034 | -4.367 |
| DS0c | -4.552 | -5.476 |
| GP01 | -2.946 | -2.304 |
| GP02 | -2.891 | -1.942 |
| GP0c | -1.04 | -1.016 |
| NOD | -1.808 | -1.847 |
| NZO | -5.557 | -4.838 |
| PWK | -5.201 | -4.757 |
| H37Rv_KO_CtpC | -1.915 | -3.94 |
| H37Rv_KO_CtpD | -1.944 | -2.576 |
| H37Rv_KO_Rv1272 | -2.651 | -3.56 |
| H37Rv_KO_SugABC | -0.819 | -1.783 |
| H37Rv_KO_MbtN | 0.476 | -1.855 |
| Trans05 | -1.832 | -3.299 |
| macrophage_unactivated | -0.978 | 0.66 |
| IL1 | -0.169 | -1.605 |
| Rapamycin | 0.249 | -1.093 |
| Tcell | -1.571 | -2.209 |
| GMCSF | 0.504 | 0.752 |
| IFNab | 1.835 | 2.283 |
| IFNg | -1.358 | -0.249 |
| IFNg_GMCSF1 | -1.012 | -0.606 |
| Rv1432_day32 | -1.288 | -3.863 |
| Rv1565c_day32 | -2.783 | -3.884 |
| secA2_input | 0.412 | -0.54 |
| delta_Rv3594 | 0.451 | -0.26 |
| delta_Rv3717 | -0.084 | 0.191 |
| delta_Rv3811 | 0.256 | 0.556 |
| delta_Rv0954 | 0.464 | 1.149 |
| PonA1 | -0.225 | 0.384 |
| EccD1_KO | 0.125 | 1.246 |
| EspI_KO | -0.046 | 0.539 |
| PE35_KO | -0.015 | 1.105 |
| PPE68_KO | -0.253 | 1.139 |
| glycerol2 | 0.156 | 0.289 |
| lignocerate | 0.488 | 0.785 |
| oleate | -0.071 | -0.537 |
| phosphatidylcholine | 0.49 | -0.106 |
| acetate | 0.401 | 2.234 |
| glucAc | 0.092 | 1.052 |
| Rv0950ko | 0.193 | 1.903 |
| Rv1096ko | -0.283 | 0.329 |
| Rv3684ko | 0.635 | 0.092 |
| delta_otsA_trehalose | -0.181 | 0.325 |