Top 10 genes with highest correlation to Rv3774/echA21:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0632c/echA3 | (cc=0.5198) | info on Rv0632c/echA3 |
| Rv3263/- | (cc=0.4944) | info on Rv3263/- |
| Rv1169c/lipX | (cc=0.4675) | info on Rv1169c/lipX |
| Rv1210/tagA | (cc=0.4262) | info on Rv1210/tagA |
| Rv0516c/- | (cc=0.4157) | info on Rv0516c/- |
| Rv0259c/- | (cc=0.4108) | info on Rv0259c/- |
| Rv3696c/glpK | (cc=0.4028) | info on Rv3696c/glpK |
| Rv2815c/- | (cc=0.4022) | info on Rv2815c/- |
| Rv0115/hddA | (cc=0.3873) | info on Rv0115/hddA |
| Rv0794c/- | (cc=0.3801) | info on Rv0794c/- |
Correlation of Rv3774/echA21 with Rv3696c/glpK
Normalized LFCs for Rv3774/echA21:
(description and provenance of datasets)
| Rv3774/echA21 | Rv3696c/glpK | |
| Fe_supp_jason_reseq | -1.018 | 1.778 |
| low_pH_jason_reseq | 0.296 | 6.0 |
| NO_jason_reseq | -0.357 | 6.0 |
| B6_jason_reseq | 1.084 | 6.0 |
| MHCII_jason_reseq | -0.437 | 1.383 |
| Isoniazid02 | -0.978 | -1.455 |
| Rifampicin4 | -0.91 | -1.995 |
| Ethambutol3 | -0.225 | 1.233 |
| Meropenem3 | -1.249 | -0.771 |
| Vancomycin16 | -2.035 | -1.366 |
| Rv2680_day32 | -0.597 | 2.647 |
| H37Rv_KO_MarP | 0.189 | 0.244 |
| hypoxia_3wks | 0.977 | 1.75 |
| hypoxia_6wks | 2.687 | 6.0 |
| glycerol | -0.554 | -5.227 |
| cholesterol | 0.026 | -0.639 |
| AJ | 0.247 | 4.528 |
| Bibs02 | 0.325 | -0.332 |
| Bibs02c | 0.424 | 0.089 |
| BL6 | -0.805 | -1.033 |
| BL6a | -0.316 | 0.664 |
| BXD01 | 0.327 | 1.68 |
| BXD010 | 0.482 | 1.312 |
| BXD011 | 0.233 | 2.299 |
| BXD03 | -0.31 | -0.426 |
| BXD04 | 1.386 | 0.835 |
| BXD05 | -0.349 | 0.526 |
| BXD06 | 0.573 | 2.16 |
| BXD07 | -0.875 | 1.097 |
| BXD08 | -0.246 | 0.628 |
| BXD09 | -0.052 | 1.682 |
| CAST | 1.276 | 5.014 |
| CCcont | -1.457 | -1.866 |
| DS01 | -0.029 | 0.161 |
| DS02 | 0.301 | 0.402 |
| DS04 | 0.455 | 1.456 |
| DS0c | 0.013 | -2.154 |
| GP01 | -0.13 | -2.071 |
| GP02 | 1.394 | -1.551 |
| GP0c | 0.197 | -2.908 |
| NOD | -0.213 | 2.301 |
| NZO | 0.691 | 4.859 |
| PWK | 2.214 | 6.0 |
| H37Rv_KO_CtpC | 0.292 | 0.534 |
| H37Rv_KO_CtpD | 0.408 | 2.55 |
| H37Rv_KO_Rv1272 | -1.637 | -1.936 |
| H37Rv_KO_SugABC | 0.734 | -0.424 |
| H37Rv_KO_MbtN | -0.385 | -0.166 |
| Trans05 | 1.04 | -0.63 |
| macrophage_unactivated | -0.868 | -1.607 |
| IL1 | 0.489 | -1.041 |
| Rapamycin | -0.491 | -1.234 |
| Tcell | 0.815 | 0.596 |
| GMCSF | -0.269 | -2.54 |
| IFNab | -1.932 | -1.061 |
| IFNg | -0.861 | -0.81 |
| IFNg_GMCSF1 | -0.864 | 1.273 |
| Rv1432_day32 | -0.456 | 0.343 |
| Rv1565c_day32 | -1.273 | -0.924 |
| secA2_input | 0.596 | -0.945 |
| delta_Rv3594 | -0.526 | -2.6 |
| delta_Rv3717 | 0.22 | -1.286 |
| delta_Rv3811 | -0.449 | -2.051 |
| delta_Rv0954 | -0.308 | -1.101 |
| PonA1 | -1.199 | 1.358 |
| EccD1_KO | -0.349 | 0.0 |
| EspI_KO | -0.083 | -0.265 |
| PE35_KO | -0.592 | 1.339 |
| PPE68_KO | -0.518 | 0.793 |
| glycerol2 | 0.894 | -2.844 |
| lignocerate | 0.823 | -1.967 |
| oleate | -1.971 | -2.165 |
| phosphatidylcholine | 0.447 | -2.139 |
| acetate | 0.981 | -1.519 |
| glucAc | 0.65 | -1.194 |
| Rv0950ko | 0.0 | -0.874 |
| Rv1096ko | 0.051 | -0.875 |
| Rv3684ko | -0.2 | -0.609 |
| delta_otsA_trehalose | -0.452 | -0.103 |