Top 10 genes with highest correlation to Rv3774/echA21:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0632c/echA3 | (cc=0.5198) | info on Rv0632c/echA3 |
| Rv3263/- | (cc=0.4944) | info on Rv3263/- |
| Rv1169c/lipX | (cc=0.4675) | info on Rv1169c/lipX |
| Rv1210/tagA | (cc=0.4262) | info on Rv1210/tagA |
| Rv0516c/- | (cc=0.4157) | info on Rv0516c/- |
| Rv0259c/- | (cc=0.4108) | info on Rv0259c/- |
| Rv3696c/glpK | (cc=0.4028) | info on Rv3696c/glpK |
| Rv2815c/- | (cc=0.4022) | info on Rv2815c/- |
| Rv0115/hddA | (cc=0.3873) | info on Rv0115/hddA |
| Rv0794c/- | (cc=0.3801) | info on Rv0794c/- |
Correlation of Rv3774/echA21 with Rv0115/hddA
Normalized LFCs for Rv3774/echA21:
(description and provenance of datasets)
| Rv3774/echA21 | Rv0115/hddA | |
| Fe_supp_jason_reseq | -1.018 | -0.505 |
| low_pH_jason_reseq | 0.296 | 0.028 |
| NO_jason_reseq | -0.357 | 0.478 |
| B6_jason_reseq | 1.084 | 0.344 |
| MHCII_jason_reseq | -0.437 | 0.484 |
| Isoniazid02 | -0.978 | -2.546 |
| Rifampicin4 | -0.91 | 0.495 |
| Ethambutol3 | -0.225 | -2.227 |
| Meropenem3 | -1.249 | -1.848 |
| Vancomycin16 | -2.035 | -0.921 |
| Rv2680_day32 | -0.597 | 0.104 |
| H37Rv_KO_MarP | 0.189 | 0.574 |
| hypoxia_3wks | 0.977 | 0.152 |
| hypoxia_6wks | 2.687 | 0.906 |
| glycerol | -0.554 | 0.521 |
| cholesterol | 0.026 | 0.021 |
| AJ | 0.247 | 0.333 |
| Bibs02 | 0.325 | -0.864 |
| Bibs02c | 0.424 | 0.191 |
| BL6 | -0.805 | -0.218 |
| BL6a | -0.316 | 0.453 |
| BXD01 | 0.327 | 0.17 |
| BXD010 | 0.482 | 0.323 |
| BXD011 | 0.233 | -0.463 |
| BXD03 | -0.31 | 0.159 |
| BXD04 | 1.386 | 0.0 |
| BXD05 | -0.349 | 0.0 |
| BXD06 | 0.573 | -0.165 |
| BXD07 | -0.875 | 0.19 |
| BXD08 | -0.246 | 0.173 |
| BXD09 | -0.052 | 0.128 |
| CAST | 1.276 | -0.23 |
| CCcont | -1.457 | 0.064 |
| DS01 | -0.029 | 0.609 |
| DS02 | 0.301 | 0.284 |
| DS04 | 0.455 | 0.489 |
| DS0c | 0.013 | -0.148 |
| GP01 | -0.13 | 0.468 |
| GP02 | 1.394 | -0.338 |
| GP0c | 0.197 | 0.469 |
| NOD | -0.213 | -0.511 |
| NZO | 0.691 | -0.136 |
| PWK | 2.214 | 0.594 |
| H37Rv_KO_CtpC | 0.292 | -0.37 |
| H37Rv_KO_CtpD | 0.408 | 1.079 |
| H37Rv_KO_Rv1272 | -1.637 | 0.109 |
| H37Rv_KO_SugABC | 0.734 | 1.569 |
| H37Rv_KO_MbtN | -0.385 | -0.653 |
| Trans05 | 1.04 | 0.575 |
| macrophage_unactivated | -0.868 | 0.11 |
| IL1 | 0.489 | -0.747 |
| Rapamycin | -0.491 | -0.709 |
| Tcell | 0.815 | 0.417 |
| GMCSF | -0.269 | -0.61 |
| IFNab | -1.932 | -0.514 |
| IFNg | -0.861 | 0.139 |
| IFNg_GMCSF1 | -0.864 | -0.694 |
| Rv1432_day32 | -0.456 | 0.029 |
| Rv1565c_day32 | -1.273 | -0.36 |
| secA2_input | 0.596 | -0.517 |
| delta_Rv3594 | -0.526 | -0.448 |
| delta_Rv3717 | 0.22 | -0.96 |
| delta_Rv3811 | -0.449 | -0.629 |
| delta_Rv0954 | -0.308 | -0.366 |
| PonA1 | -1.199 | -0.806 |
| EccD1_KO | -0.349 | -1.246 |
| EspI_KO | -0.083 | -0.422 |
| PE35_KO | -0.592 | -0.627 |
| PPE68_KO | -0.518 | -0.659 |
| glycerol2 | 0.894 | 0.332 |
| lignocerate | 0.823 | 0.544 |
| oleate | -1.971 | 0.072 |
| phosphatidylcholine | 0.447 | 0.392 |
| acetate | 0.981 | 0.258 |
| glucAc | 0.65 | 0.389 |
| Rv0950ko | 0.0 | 0.241 |
| Rv1096ko | 0.051 | -0.642 |
| Rv3684ko | -0.2 | -1.055 |
| delta_otsA_trehalose | -0.452 | -0.019 |