Top 10 genes with highest correlation to Rv3774/echA21:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0632c/echA3 | (cc=0.5198) | info on Rv0632c/echA3 |
| Rv3263/- | (cc=0.4944) | info on Rv3263/- |
| Rv1169c/lipX | (cc=0.4675) | info on Rv1169c/lipX |
| Rv1210/tagA | (cc=0.4262) | info on Rv1210/tagA |
| Rv0516c/- | (cc=0.4157) | info on Rv0516c/- |
| Rv0259c/- | (cc=0.4108) | info on Rv0259c/- |
| Rv3696c/glpK | (cc=0.4028) | info on Rv3696c/glpK |
| Rv2815c/- | (cc=0.4022) | info on Rv2815c/- |
| Rv0115/hddA | (cc=0.3873) | info on Rv0115/hddA |
| Rv0794c/- | (cc=0.3801) | info on Rv0794c/- |
Correlation of Rv3774/echA21 with Rv0516c/-
Normalized LFCs for Rv3774/echA21:
(description and provenance of datasets)
| Rv3774/echA21 | Rv0516c/- | |
| Fe_supp_jason_reseq | -1.018 | 0.791 |
| low_pH_jason_reseq | 0.296 | -0.519 |
| NO_jason_reseq | -0.357 | -0.543 |
| B6_jason_reseq | 1.084 | 0.362 |
| MHCII_jason_reseq | -0.437 | -0.18 |
| Isoniazid02 | -0.978 | 0.115 |
| Rifampicin4 | -0.91 | -0.98 |
| Ethambutol3 | -0.225 | -1.064 |
| Meropenem3 | -1.249 | -0.409 |
| Vancomycin16 | -2.035 | -1.329 |
| Rv2680_day32 | -0.597 | 0.378 |
| H37Rv_KO_MarP | 0.189 | -0.741 |
| hypoxia_3wks | 0.977 | 0.666 |
| hypoxia_6wks | 2.687 | 0.672 |
| glycerol | -0.554 | -1.065 |
| cholesterol | 0.026 | -0.012 |
| AJ | 0.247 | 0.765 |
| Bibs02 | 0.325 | 0.252 |
| Bibs02c | 0.424 | 0.095 |
| BL6 | -0.805 | 0.08 |
| BL6a | -0.316 | 0.184 |
| BXD01 | 0.327 | -0.323 |
| BXD010 | 0.482 | 0.662 |
| BXD011 | 0.233 | -0.146 |
| BXD03 | -0.31 | -0.098 |
| BXD04 | 1.386 | -0.02 |
| BXD05 | -0.349 | 0.041 |
| BXD06 | 0.573 | -0.581 |
| BXD07 | -0.875 | -0.032 |
| BXD08 | -0.246 | -0.175 |
| BXD09 | -0.052 | -0.21 |
| CAST | 1.276 | -0.429 |
| CCcont | -1.457 | -0.095 |
| DS01 | -0.029 | 1.521 |
| DS02 | 0.301 | 1.508 |
| DS04 | 0.455 | 1.05 |
| DS0c | 0.013 | 1.101 |
| GP01 | -0.13 | 0.377 |
| GP02 | 1.394 | 1.341 |
| GP0c | 0.197 | 0.277 |
| NOD | -0.213 | -0.07 |
| NZO | 0.691 | 1.195 |
| PWK | 2.214 | 0.153 |
| H37Rv_KO_CtpC | 0.292 | -0.124 |
| H37Rv_KO_CtpD | 0.408 | 0.019 |
| H37Rv_KO_Rv1272 | -1.637 | 0.811 |
| H37Rv_KO_SugABC | 0.734 | 0.982 |
| H37Rv_KO_MbtN | -0.385 | 0.371 |
| Trans05 | 1.04 | 0.874 |
| macrophage_unactivated | -0.868 | 0.357 |
| IL1 | 0.489 | -0.472 |
| Rapamycin | -0.491 | -0.325 |
| Tcell | 0.815 | -0.596 |
| GMCSF | -0.269 | -0.515 |
| IFNab | -1.932 | 0.372 |
| IFNg | -0.861 | -0.588 |
| IFNg_GMCSF1 | -0.864 | -0.104 |
| Rv1432_day32 | -0.456 | 0.546 |
| Rv1565c_day32 | -1.273 | -2.688 |
| secA2_input | 0.596 | 0.593 |
| delta_Rv3594 | -0.526 | 0.756 |
| delta_Rv3717 | 0.22 | 0.646 |
| delta_Rv3811 | -0.449 | 0.796 |
| delta_Rv0954 | -0.308 | 0.141 |
| PonA1 | -1.199 | -0.096 |
| EccD1_KO | -0.349 | -0.339 |
| EspI_KO | -0.083 | 0.066 |
| PE35_KO | -0.592 | -0.607 |
| PPE68_KO | -0.518 | -1.008 |
| glycerol2 | 0.894 | 1.267 |
| lignocerate | 0.823 | 1.091 |
| oleate | -1.971 | -1.319 |
| phosphatidylcholine | 0.447 | 0.745 |
| acetate | 0.981 | 1.413 |
| glucAc | 0.65 | 0.732 |
| Rv0950ko | 0.0 | -0.356 |
| Rv1096ko | 0.051 | 0.679 |
| Rv3684ko | -0.2 | 0.498 |
| delta_otsA_trehalose | -0.452 | -0.949 |