Top 10 genes with highest correlation to Rv3774/echA21:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0632c/echA3 | (cc=0.5198) | info on Rv0632c/echA3 |
| Rv3263/- | (cc=0.4944) | info on Rv3263/- |
| Rv1169c/lipX | (cc=0.4675) | info on Rv1169c/lipX |
| Rv1210/tagA | (cc=0.4262) | info on Rv1210/tagA |
| Rv0516c/- | (cc=0.4157) | info on Rv0516c/- |
| Rv0259c/- | (cc=0.4108) | info on Rv0259c/- |
| Rv3696c/glpK | (cc=0.4028) | info on Rv3696c/glpK |
| Rv2815c/- | (cc=0.4022) | info on Rv2815c/- |
| Rv0115/hddA | (cc=0.3873) | info on Rv0115/hddA |
| Rv0794c/- | (cc=0.3801) | info on Rv0794c/- |
Correlation of Rv3774/echA21 with Rv1169c/lipX
Normalized LFCs for Rv3774/echA21:
(description and provenance of datasets)
| Rv3774/echA21 | Rv1169c/lipX | |
| Fe_supp_jason_reseq | -1.018 | 0.079 |
| low_pH_jason_reseq | 0.296 | 0.321 |
| NO_jason_reseq | -0.357 | 0.701 |
| B6_jason_reseq | 1.084 | -0.978 |
| MHCII_jason_reseq | -0.437 | -0.759 |
| Isoniazid02 | -0.978 | -3.566 |
| Rifampicin4 | -0.91 | 0.458 |
| Ethambutol3 | -0.225 | -3.227 |
| Meropenem3 | -1.249 | -4.373 |
| Vancomycin16 | -2.035 | -1.366 |
| Rv2680_day32 | -0.597 | -0.773 |
| H37Rv_KO_MarP | 0.189 | 0.869 |
| hypoxia_3wks | 0.977 | 1.619 |
| hypoxia_6wks | 2.687 | 1.806 |
| glycerol | -0.554 | -1.953 |
| cholesterol | 0.026 | 0.162 |
| AJ | 0.247 | 1.314 |
| Bibs02 | 0.325 | 0.73 |
| Bibs02c | 0.424 | -0.568 |
| BL6 | -0.805 | -0.365 |
| BL6a | -0.316 | 0.469 |
| BXD01 | 0.327 | 0.429 |
| BXD010 | 0.482 | 0.353 |
| BXD011 | 0.233 | -0.065 |
| BXD03 | -0.31 | 0.393 |
| BXD04 | 1.386 | 0.843 |
| BXD05 | -0.349 | 0.736 |
| BXD06 | 0.573 | 0.862 |
| BXD07 | -0.875 | -0.011 |
| BXD08 | -0.246 | -0.744 |
| BXD09 | -0.052 | 1.031 |
| CAST | 1.276 | -0.098 |
| CCcont | -1.457 | -0.093 |
| DS01 | -0.029 | 0.0 |
| DS02 | 0.301 | 0.243 |
| DS04 | 0.455 | 0.916 |
| DS0c | 0.013 | -0.357 |
| GP01 | -0.13 | -0.207 |
| GP02 | 1.394 | 1.683 |
| GP0c | 0.197 | -0.19 |
| NOD | -0.213 | 0.443 |
| NZO | 0.691 | 1.441 |
| PWK | 2.214 | 1.081 |
| H37Rv_KO_CtpC | 0.292 | 0.34 |
| H37Rv_KO_CtpD | 0.408 | -1.93 |
| H37Rv_KO_Rv1272 | -1.637 | 0.799 |
| H37Rv_KO_SugABC | 0.734 | -1.493 |
| H37Rv_KO_MbtN | -0.385 | -0.948 |
| Trans05 | 1.04 | 1.852 |
| macrophage_unactivated | -0.868 | 0.18 |
| IL1 | 0.489 | 0.11 |
| Rapamycin | -0.491 | -0.721 |
| Tcell | 0.815 | 0.762 |
| GMCSF | -0.269 | -1.03 |
| IFNab | -1.932 | -0.94 |
| IFNg | -0.861 | 0.227 |
| IFNg_GMCSF1 | -0.864 | -0.27 |
| Rv1432_day32 | -0.456 | 0.18 |
| Rv1565c_day32 | -1.273 | -4.364 |
| secA2_input | 0.596 | 0.515 |
| delta_Rv3594 | -0.526 | -0.762 |
| delta_Rv3717 | 0.22 | -0.863 |
| delta_Rv3811 | -0.449 | -1.145 |
| delta_Rv0954 | -0.308 | -2.038 |
| PonA1 | -1.199 | -1.794 |
| EccD1_KO | -0.349 | -0.135 |
| EspI_KO | -0.083 | -0.878 |
| PE35_KO | -0.592 | 0.808 |
| PPE68_KO | -0.518 | 0.605 |
| glycerol2 | 0.894 | 0.611 |
| lignocerate | 0.823 | 0.095 |
| oleate | -1.971 | -0.098 |
| phosphatidylcholine | 0.447 | 0.618 |
| acetate | 0.981 | 0.454 |
| glucAc | 0.65 | -0.126 |
| Rv0950ko | 0.0 | -0.154 |
| Rv1096ko | 0.051 | -0.953 |
| Rv3684ko | -0.2 | -2.053 |
| delta_otsA_trehalose | -0.452 | -0.471 |