Top 10 genes with highest correlation to Rv3774/echA21:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0632c/echA3 | (cc=0.5198) | info on Rv0632c/echA3 |
| Rv3263/- | (cc=0.4944) | info on Rv3263/- |
| Rv1169c/lipX | (cc=0.4675) | info on Rv1169c/lipX |
| Rv1210/tagA | (cc=0.4262) | info on Rv1210/tagA |
| Rv0516c/- | (cc=0.4157) | info on Rv0516c/- |
| Rv0259c/- | (cc=0.4108) | info on Rv0259c/- |
| Rv3696c/glpK | (cc=0.4028) | info on Rv3696c/glpK |
| Rv2815c/- | (cc=0.4022) | info on Rv2815c/- |
| Rv0115/hddA | (cc=0.3873) | info on Rv0115/hddA |
| Rv0794c/- | (cc=0.3801) | info on Rv0794c/- |
Correlation of Rv3774/echA21 with Rv0632c/echA3
Normalized LFCs for Rv3774/echA21:
(description and provenance of datasets)
| Rv3774/echA21 | Rv0632c/echA3 | |
| Fe_supp_jason_reseq | -1.018 | -1.642 |
| low_pH_jason_reseq | 0.296 | 0.659 |
| NO_jason_reseq | -0.357 | -1.683 |
| B6_jason_reseq | 1.084 | 1.226 |
| MHCII_jason_reseq | -0.437 | -0.688 |
| Isoniazid02 | -0.978 | -0.448 |
| Rifampicin4 | -0.91 | -0.49 |
| Ethambutol3 | -0.225 | 0.309 |
| Meropenem3 | -1.249 | -0.404 |
| Vancomycin16 | -2.035 | -0.48 |
| Rv2680_day32 | -0.597 | -1.75 |
| H37Rv_KO_MarP | 0.189 | 0.756 |
| hypoxia_3wks | 0.977 | 1.053 |
| hypoxia_6wks | 2.687 | 2.351 |
| glycerol | -0.554 | -0.047 |
| cholesterol | 0.026 | 0.014 |
| AJ | 0.247 | -0.393 |
| Bibs02 | 0.325 | 0.415 |
| Bibs02c | 0.424 | 0.558 |
| BL6 | -0.805 | -0.661 |
| BL6a | -0.316 | 0.288 |
| BXD01 | 0.327 | 0.48 |
| BXD010 | 0.482 | 0.683 |
| BXD011 | 0.233 | 1.214 |
| BXD03 | -0.31 | -0.038 |
| BXD04 | 1.386 | 1.201 |
| BXD05 | -0.349 | 0.392 |
| BXD06 | 0.573 | 1.466 |
| BXD07 | -0.875 | -0.019 |
| BXD08 | -0.246 | 0.156 |
| BXD09 | -0.052 | -0.033 |
| CAST | 1.276 | 0.564 |
| CCcont | -1.457 | -2.271 |
| DS01 | -0.029 | -0.123 |
| DS02 | 0.301 | -0.199 |
| DS04 | 0.455 | 0.291 |
| DS0c | 0.013 | 0.163 |
| GP01 | -0.13 | 0.014 |
| GP02 | 1.394 | 0.059 |
| GP0c | 0.197 | -0.747 |
| NOD | -0.213 | -0.356 |
| NZO | 0.691 | -0.027 |
| PWK | 2.214 | 2.134 |
| H37Rv_KO_CtpC | 0.292 | -0.461 |
| H37Rv_KO_CtpD | 0.408 | -1.072 |
| H37Rv_KO_Rv1272 | -1.637 | -0.359 |
| H37Rv_KO_SugABC | 0.734 | 1.032 |
| H37Rv_KO_MbtN | -0.385 | 0.488 |
| Trans05 | 1.04 | -0.371 |
| macrophage_unactivated | -0.868 | -0.379 |
| IL1 | 0.489 | 0.039 |
| Rapamycin | -0.491 | 0.417 |
| Tcell | 0.815 | 1.287 |
| GMCSF | -0.269 | -0.396 |
| IFNab | -1.932 | -1.167 |
| IFNg | -0.861 | 0.572 |
| IFNg_GMCSF1 | -0.864 | -0.044 |
| Rv1432_day32 | -0.456 | 1.731 |
| Rv1565c_day32 | -1.273 | -1.374 |
| secA2_input | 0.596 | -0.103 |
| delta_Rv3594 | -0.526 | -0.488 |
| delta_Rv3717 | 0.22 | 0.459 |
| delta_Rv3811 | -0.449 | 0.0 |
| delta_Rv0954 | -0.308 | -0.51 |
| PonA1 | -1.199 | 0.321 |
| EccD1_KO | -0.349 | 0.51 |
| EspI_KO | -0.083 | -0.827 |
| PE35_KO | -0.592 | 0.0 |
| PPE68_KO | -0.518 | -0.403 |
| glycerol2 | 0.894 | -0.548 |
| lignocerate | 0.823 | -0.835 |
| oleate | -1.971 | -0.846 |
| phosphatidylcholine | 0.447 | -0.335 |
| acetate | 0.981 | -0.992 |
| glucAc | 0.65 | -1.855 |
| Rv0950ko | 0.0 | -0.214 |
| Rv1096ko | 0.051 | 0.461 |
| Rv3684ko | -0.2 | 0.147 |
| delta_otsA_trehalose | -0.452 | -1.083 |