Top 10 genes with highest correlation to Rv3707c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3450c/eccB4 | (cc=0.5301) | info on Rv3450c/eccB4 |
| Rv3911/sigM | (cc=0.5154) | info on Rv3911/sigM |
| Rv2748c/ftsK | (cc=0.5139) | info on Rv2748c/ftsK |
| Rv3661/- | (cc=0.4874) | info on Rv3661/- |
| Rv0536/galE3 | (cc=0.4759) | info on Rv0536/galE3 |
| Rv0597c/- | (cc=0.4539) | info on Rv0597c/- |
| Rv1859/modC | (cc=0.4538) | info on Rv1859/modC |
| Rv0493c/- | (cc=0.4434) | info on Rv0493c/- |
| Rv2016/- | (cc=0.4387) | info on Rv2016/- |
| Rv0701/rplC | (cc=0.4372) | info on Rv0701/rplC |
Correlation of Rv3707c/- with Rv3911/sigM
Normalized LFCs for Rv3707c/-:
(description and provenance of datasets)
| Rv3707c/- | Rv3911/sigM | |
| Fe_supp_jason_reseq | 0.796 | 0.845 |
| low_pH_jason_reseq | -0.765 | 0.207 |
| NO_jason_reseq | -0.391 | -0.129 |
| B6_jason_reseq | 0.398 | 0.544 |
| MHCII_jason_reseq | 0.661 | 0.456 |
| Isoniazid02 | 0.406 | 0.304 |
| Rifampicin4 | 1.199 | 0.292 |
| Ethambutol3 | 1.063 | 0.519 |
| Meropenem3 | 0.189 | 0.165 |
| Vancomycin16 | 0.462 | -0.218 |
| Rv2680_day32 | -0.097 | -0.69 |
| H37Rv_KO_MarP | 0.254 | 0.969 |
| hypoxia_3wks | -0.159 | 0.048 |
| hypoxia_6wks | 0.428 | -0.177 |
| glycerol | -0.044 | 0.063 |
| cholesterol | -0.263 | -0.466 |
| AJ | -0.471 | 0.276 |
| Bibs02 | 0.099 | 0.842 |
| Bibs02c | -0.027 | 0.065 |
| BL6 | -1.348 | -0.729 |
| BL6a | -0.242 | -0.491 |
| BXD01 | -1.024 | -1.063 |
| BXD010 | 0.714 | -0.369 |
| BXD011 | -0.465 | -0.8 |
| BXD03 | -0.494 | -0.789 |
| BXD04 | -0.673 | -0.388 |
| BXD05 | -0.315 | -0.554 |
| BXD06 | -0.624 | -0.918 |
| BXD07 | -0.073 | -0.176 |
| BXD08 | -0.543 | -0.866 |
| BXD09 | -0.685 | -0.915 |
| CAST | -0.641 | 0.519 |
| CCcont | -0.823 | -0.468 |
| DS01 | 0.953 | 0.556 |
| DS02 | 0.477 | 1.019 |
| DS04 | 0.271 | 0.013 |
| DS0c | 0.825 | 0.669 |
| GP01 | 0.978 | 0.749 |
| GP02 | 1.421 | 0.56 |
| GP0c | 0.591 | 0.293 |
| NOD | 0.238 | 0.366 |
| NZO | -0.5 | 0.038 |
| PWK | -0.139 | -0.665 |
| H37Rv_KO_CtpC | -0.884 | 0.071 |
| H37Rv_KO_CtpD | -0.907 | -0.397 |
| H37Rv_KO_Rv1272 | 0.423 | 0.318 |
| H37Rv_KO_SugABC | 0.217 | 0.31 |
| H37Rv_KO_MbtN | -1.111 | -1.617 |
| Trans05 | -1.377 | 0.048 |
| macrophage_unactivated | -0.347 | -1.411 |
| IL1 | 0.418 | 0.249 |
| Rapamycin | 0.064 | -0.212 |
| Tcell | -0.238 | -0.16 |
| GMCSF | 0.618 | 0.222 |
| IFNab | 0.635 | 0.281 |
| IFNg | 0.577 | -0.796 |
| IFNg_GMCSF1 | 0.66 | -0.443 |
| Rv1432_day32 | -0.133 | 1.061 |
| Rv1565c_day32 | -0.201 | -0.945 |
| secA2_input | 1.443 | -0.654 |
| delta_Rv3594 | -0.046 | 0.08 |
| delta_Rv3717 | 0.0 | 0.082 |
| delta_Rv3811 | 0.546 | 0.51 |
| delta_Rv0954 | 0.092 | 0.181 |
| PonA1 | 0.568 | 0.175 |
| EccD1_KO | -0.845 | 0.181 |
| EspI_KO | -1.121 | -0.953 |
| PE35_KO | -1.33 | -1.251 |
| PPE68_KO | -0.787 | -0.605 |
| glycerol2 | -0.034 | 0.347 |
| lignocerate | 0.195 | 0.494 |
| oleate | -0.418 | 0.051 |
| phosphatidylcholine | 0.083 | 0.193 |
| acetate | 0.266 | 0.0 |
| glucAc | 0.073 | 0.108 |
| Rv0950ko | 0.081 | -0.856 |
| Rv1096ko | 0.081 | -0.458 |
| Rv3684ko | -0.046 | -0.17 |
| delta_otsA_trehalose | -0.078 | -1.347 |