Top 10 genes with highest correlation to Rv3707c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3450c/eccB4 | (cc=0.5301) | info on Rv3450c/eccB4 |
| Rv3911/sigM | (cc=0.5154) | info on Rv3911/sigM |
| Rv2748c/ftsK | (cc=0.5139) | info on Rv2748c/ftsK |
| Rv3661/- | (cc=0.4874) | info on Rv3661/- |
| Rv0536/galE3 | (cc=0.4759) | info on Rv0536/galE3 |
| Rv0597c/- | (cc=0.4539) | info on Rv0597c/- |
| Rv1859/modC | (cc=0.4538) | info on Rv1859/modC |
| Rv0493c/- | (cc=0.4434) | info on Rv0493c/- |
| Rv2016/- | (cc=0.4387) | info on Rv2016/- |
| Rv0701/rplC | (cc=0.4372) | info on Rv0701/rplC |
Correlation of Rv3707c/- with Rv2016/-
Normalized LFCs for Rv3707c/-:
(description and provenance of datasets)
| Rv3707c/- | Rv2016/- | |
| Fe_supp_jason_reseq | 0.796 | 0.543 |
| low_pH_jason_reseq | -0.765 | -0.842 |
| NO_jason_reseq | -0.391 | -1.016 |
| B6_jason_reseq | 0.398 | 0.723 |
| MHCII_jason_reseq | 0.661 | 0.821 |
| Isoniazid02 | 0.406 | 1.934 |
| Rifampicin4 | 1.199 | 1.782 |
| Ethambutol3 | 1.063 | 2.343 |
| Meropenem3 | 0.189 | 0.386 |
| Vancomycin16 | 0.462 | -0.26 |
| Rv2680_day32 | -0.097 | 0.832 |
| H37Rv_KO_MarP | 0.254 | 0.065 |
| hypoxia_3wks | -0.159 | -0.136 |
| hypoxia_6wks | 0.428 | 0.357 |
| glycerol | -0.044 | -0.685 |
| cholesterol | -0.263 | 0.606 |
| AJ | -0.471 | 0.798 |
| Bibs02 | 0.099 | 0.087 |
| Bibs02c | -0.027 | 0.129 |
| BL6 | -1.348 | -2.032 |
| BL6a | -0.242 | -0.944 |
| BXD01 | -1.024 | -1.68 |
| BXD010 | 0.714 | -0.946 |
| BXD011 | -0.465 | -0.786 |
| BXD03 | -0.494 | -0.908 |
| BXD04 | -0.673 | -0.89 |
| BXD05 | -0.315 | -0.3 |
| BXD06 | -0.624 | -0.339 |
| BXD07 | -0.073 | -1.786 |
| BXD08 | -0.543 | -1.051 |
| BXD09 | -0.685 | -1.366 |
| CAST | -0.641 | -0.25 |
| CCcont | -0.823 | -1.693 |
| DS01 | 0.953 | 0.52 |
| DS02 | 0.477 | 0.589 |
| DS04 | 0.271 | 1.419 |
| DS0c | 0.825 | 1.365 |
| GP01 | 0.978 | 0.984 |
| GP02 | 1.421 | -1.116 |
| GP0c | 0.591 | 0.754 |
| NOD | 0.238 | 0.348 |
| NZO | -0.5 | -1.435 |
| PWK | -0.139 | 0.112 |
| H37Rv_KO_CtpC | -0.884 | -0.665 |
| H37Rv_KO_CtpD | -0.907 | 0.543 |
| H37Rv_KO_Rv1272 | 0.423 | -1.286 |
| H37Rv_KO_SugABC | 0.217 | 0.484 |
| H37Rv_KO_MbtN | -1.111 | -2.076 |
| Trans05 | -1.377 | -0.238 |
| macrophage_unactivated | -0.347 | -0.388 |
| IL1 | 0.418 | -1.35 |
| Rapamycin | 0.064 | -1.979 |
| Tcell | -0.238 | -0.935 |
| GMCSF | 0.618 | 0.211 |
| IFNab | 0.635 | -1.327 |
| IFNg | 0.577 | -0.577 |
| IFNg_GMCSF1 | 0.66 | -0.723 |
| Rv1432_day32 | -0.133 | -0.111 |
| Rv1565c_day32 | -0.201 | 0.411 |
| secA2_input | 1.443 | -0.88 |
| delta_Rv3594 | -0.046 | -0.242 |
| delta_Rv3717 | 0.0 | 0.087 |
| delta_Rv3811 | 0.546 | 0.678 |
| delta_Rv0954 | 0.092 | 0.548 |
| PonA1 | 0.568 | 0.943 |
| EccD1_KO | -0.845 | 0.332 |
| EspI_KO | -1.121 | 0.596 |
| PE35_KO | -1.33 | -1.435 |
| PPE68_KO | -0.787 | -1.193 |
| glycerol2 | -0.034 | 0.168 |
| lignocerate | 0.195 | -0.257 |
| oleate | -0.418 | 0.05 |
| phosphatidylcholine | 0.083 | -0.238 |
| acetate | 0.266 | 0.903 |
| glucAc | 0.073 | -0.283 |
| Rv0950ko | 0.081 | 0.0 |
| Rv1096ko | 0.081 | 0.106 |
| Rv3684ko | -0.046 | 0.383 |
| delta_otsA_trehalose | -0.078 | -1.511 |