Top 10 genes with highest correlation to Rv3707c/-:
update plot | correlation | link to info on gene |
---|---|---|
Rv3450c/eccB4 | (cc=0.5301) | info on Rv3450c/eccB4 |
Rv3911/sigM | (cc=0.5154) | info on Rv3911/sigM |
Rv2748c/ftsK | (cc=0.5139) | info on Rv2748c/ftsK |
Rv3661/- | (cc=0.4874) | info on Rv3661/- |
Rv0536/galE3 | (cc=0.4759) | info on Rv0536/galE3 |
Rv0597c/- | (cc=0.4539) | info on Rv0597c/- |
Rv1859/modC | (cc=0.4538) | info on Rv1859/modC |
Rv0493c/- | (cc=0.4434) | info on Rv0493c/- |
Rv2016/- | (cc=0.4387) | info on Rv2016/- |
Rv0701/rplC | (cc=0.4372) | info on Rv0701/rplC |
Correlation of Rv3707c/- with Rv0701/rplC
Normalized LFCs for Rv3707c/-:
(description and provenance of datasets)
Rv3707c/- | Rv0701/rplC | |
Fe_supp_jason_reseq | 0.796 | 0.0 |
low_pH_jason_reseq | -0.765 | 0.0 |
NO_jason_reseq | -0.391 | 0.0 |
B6_jason_reseq | 0.398 | 0.0 |
MHCII_jason_reseq | 0.661 | 0.0 |
Isoniazid02 | 0.406 | 0.0 |
Rifampicin4 | 1.199 | 0.0 |
Ethambutol3 | 1.063 | 0.0 |
Meropenem3 | 0.189 | 0.0 |
Vancomycin16 | 0.462 | 0.0 |
Rv2680_day32 | -0.097 | 0.0 |
H37Rv_KO_MarP | 0.254 | 0.0 |
hypoxia_3wks | -0.159 | 0.0 |
hypoxia_6wks | 0.428 | 0.0 |
glycerol | -0.044 | 0.0 |
cholesterol | -0.263 | 0.0 |
AJ | -0.471 | 0.0 |
Bibs02 | 0.099 | 0.0 |
Bibs02c | -0.027 | 0.0 |
BL6 | -1.348 | 0.0 |
BL6a | -0.242 | 0.0 |
BXD01 | -1.024 | 0.0 |
BXD010 | 0.714 | 0.0 |
BXD011 | -0.465 | 0.0 |
BXD03 | -0.494 | 0.0 |
BXD04 | -0.673 | 0.0 |
BXD05 | -0.315 | 0.0 |
BXD06 | -0.624 | 0.0 |
BXD07 | -0.073 | 0.0 |
BXD08 | -0.543 | 0.0 |
BXD09 | -0.685 | 0.0 |
CAST | -0.641 | 0.0 |
CCcont | -0.823 | 0.0 |
DS01 | 0.953 | 0.0 |
DS02 | 0.477 | 0.0 |
DS04 | 0.271 | 0.0 |
DS0c | 0.825 | 0.0 |
GP01 | 0.978 | 0.0 |
GP02 | 1.421 | 0.0 |
GP0c | 0.591 | 0.13 |
NOD | 0.238 | 0.0 |
NZO | -0.5 | 0.0 |
PWK | -0.139 | 0.0 |
H37Rv_KO_CtpC | -0.884 | 0.0 |
H37Rv_KO_CtpD | -0.907 | 0.0 |
H37Rv_KO_Rv1272 | 0.423 | 0.0 |
H37Rv_KO_SugABC | 0.217 | 0.0 |
H37Rv_KO_MbtN | -1.111 | 0.0 |
Trans05 | -1.377 | 0.0 |
macrophage_unactivated | -0.347 | 0.0 |
IL1 | 0.418 | 0.0 |
Rapamycin | 0.064 | 0.0 |
Tcell | -0.238 | 0.0 |
GMCSF | 0.618 | 0.0 |
IFNab | 0.635 | 0.0 |
IFNg | 0.577 | 0.0 |
IFNg_GMCSF1 | 0.66 | 0.0 |
Rv1432_day32 | -0.133 | 0.0 |
Rv1565c_day32 | -0.201 | 0.0 |
secA2_input | 1.443 | 1.675 |
delta_Rv3594 | -0.046 | 0.0 |
delta_Rv3717 | 0.0 | 0.0 |
delta_Rv3811 | 0.546 | 0.0 |
delta_Rv0954 | 0.092 | 0.0 |
PonA1 | 0.568 | 0.0 |
EccD1_KO | -0.845 | -1.47 |
EspI_KO | -1.121 | -1.668 |
PE35_KO | -1.33 | -1.706 |
PPE68_KO | -0.787 | -1.872 |
glycerol2 | -0.034 | 0.0 |
lignocerate | 0.195 | 0.0 |
oleate | -0.418 | 0.0 |
phosphatidylcholine | 0.083 | 0.0 |
acetate | 0.266 | 0.0 |
glucAc | 0.073 | 0.0 |
Rv0950ko | 0.081 | 0.0 |
Rv1096ko | 0.081 | 0.0 |
Rv3684ko | -0.046 | 0.0 |
delta_otsA_trehalose | -0.078 | 0.254 |