Top 10 genes with highest correlation to Rv3707c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3450c/eccB4 | (cc=0.5301) | info on Rv3450c/eccB4 |
| Rv3911/sigM | (cc=0.5154) | info on Rv3911/sigM |
| Rv2748c/ftsK | (cc=0.5139) | info on Rv2748c/ftsK |
| Rv3661/- | (cc=0.4874) | info on Rv3661/- |
| Rv0536/galE3 | (cc=0.4759) | info on Rv0536/galE3 |
| Rv0597c/- | (cc=0.4539) | info on Rv0597c/- |
| Rv1859/modC | (cc=0.4538) | info on Rv1859/modC |
| Rv0493c/- | (cc=0.4434) | info on Rv0493c/- |
| Rv2016/- | (cc=0.4387) | info on Rv2016/- |
| Rv0701/rplC | (cc=0.4372) | info on Rv0701/rplC |
Correlation of Rv3707c/- with Rv0536/galE3
Normalized LFCs for Rv3707c/-:
(description and provenance of datasets)
| Rv3707c/- | Rv0536/galE3 | |
| Fe_supp_jason_reseq | 0.796 | 0.526 |
| low_pH_jason_reseq | -0.765 | -0.93 |
| NO_jason_reseq | -0.391 | 0.627 |
| B6_jason_reseq | 0.398 | 2.259 |
| MHCII_jason_reseq | 0.661 | 1.314 |
| Isoniazid02 | 0.406 | 1.107 |
| Rifampicin4 | 1.199 | 0.406 |
| Ethambutol3 | 1.063 | 1.216 |
| Meropenem3 | 0.189 | 0.102 |
| Vancomycin16 | 0.462 | 0.271 |
| Rv2680_day32 | -0.097 | 1.525 |
| H37Rv_KO_MarP | 0.254 | -0.425 |
| hypoxia_3wks | -0.159 | -0.144 |
| hypoxia_6wks | 0.428 | 0.213 |
| glycerol | -0.044 | 0.184 |
| cholesterol | -0.263 | 0.812 |
| AJ | -0.471 | 0.691 |
| Bibs02 | 0.099 | 1.101 |
| Bibs02c | -0.027 | 0.705 |
| BL6 | -1.348 | -0.688 |
| BL6a | -0.242 | -0.047 |
| BXD01 | -1.024 | -0.797 |
| BXD010 | 0.714 | -0.898 |
| BXD011 | -0.465 | -0.878 |
| BXD03 | -0.494 | -0.553 |
| BXD04 | -0.673 | -0.506 |
| BXD05 | -0.315 | -0.781 |
| BXD06 | -0.624 | -1.083 |
| BXD07 | -0.073 | -0.939 |
| BXD08 | -0.543 | -1.224 |
| BXD09 | -0.685 | -0.703 |
| CAST | -0.641 | 0.612 |
| CCcont | -0.823 | -1.352 |
| DS01 | 0.953 | 0.683 |
| DS02 | 0.477 | 0.657 |
| DS04 | 0.271 | 0.516 |
| DS0c | 0.825 | 0.841 |
| GP01 | 0.978 | -0.042 |
| GP02 | 1.421 | 3.061 |
| GP0c | 0.591 | -0.412 |
| NOD | 0.238 | -0.639 |
| NZO | -0.5 | 0.603 |
| PWK | -0.139 | 1.044 |
| H37Rv_KO_CtpC | -0.884 | -1.276 |
| H37Rv_KO_CtpD | -0.907 | 0.723 |
| H37Rv_KO_Rv1272 | 0.423 | -2.26 |
| H37Rv_KO_SugABC | 0.217 | -0.187 |
| H37Rv_KO_MbtN | -1.111 | -1.771 |
| Trans05 | -1.377 | -1.094 |
| macrophage_unactivated | -0.347 | 0.442 |
| IL1 | 0.418 | 0.721 |
| Rapamycin | 0.064 | 0.512 |
| Tcell | -0.238 | 0.414 |
| GMCSF | 0.618 | 0.404 |
| IFNab | 0.635 | -0.62 |
| IFNg | 0.577 | -0.548 |
| IFNg_GMCSF1 | 0.66 | 0.804 |
| Rv1432_day32 | -0.133 | -0.042 |
| Rv1565c_day32 | -0.201 | -0.528 |
| secA2_input | 1.443 | 0.044 |
| delta_Rv3594 | -0.046 | 0.281 |
| delta_Rv3717 | 0.0 | 0.773 |
| delta_Rv3811 | 0.546 | 0.543 |
| delta_Rv0954 | 0.092 | 0.756 |
| PonA1 | 0.568 | 0.804 |
| EccD1_KO | -0.845 | 0.049 |
| EspI_KO | -1.121 | -1.332 |
| PE35_KO | -1.33 | -0.627 |
| PPE68_KO | -0.787 | -0.982 |
| glycerol2 | -0.034 | 0.778 |
| lignocerate | 0.195 | 0.414 |
| oleate | -0.418 | 0.457 |
| phosphatidylcholine | 0.083 | 0.734 |
| acetate | 0.266 | 1.187 |
| glucAc | 0.073 | 1.034 |
| Rv0950ko | 0.081 | -1.194 |
| Rv1096ko | 0.081 | 0.115 |
| Rv3684ko | -0.046 | -1.729 |
| delta_otsA_trehalose | -0.078 | 0.0 |