Top 10 genes with highest correlation to Rv3563/fadE32:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3551/- | (cc=0.7092) | info on Rv3551/- |
| Rv3535c/hsaG | (cc=0.6806) | info on Rv3535c/hsaG |
| Rv3544c/fadE28 | (cc=0.6688) | info on Rv3544c/fadE28 |
| Rv3869/eccB1 | (cc=0.6632) | info on Rv3869/eccB1 |
| Rv3502c/- | (cc=0.6566) | info on Rv3502c/- |
| Rv3882c/eccE1 | (cc=0.6496) | info on Rv3882c/eccE1 |
| Rv0485/- | (cc=0.6463) | info on Rv0485/- |
| Rv3870/eccCa1 | (cc=0.6457) | info on Rv3870/eccCa1 |
| Rv3400/- | (cc=0.639) | info on Rv3400/- |
| Rv3871/eccCb1 | (cc=0.6221) | info on Rv3871/eccCb1 |
Correlation of Rv3563/fadE32 with Rv3882c/eccE1
Normalized LFCs for Rv3563/fadE32:
(description and provenance of datasets)
| Rv3563/fadE32 | Rv3882c/eccE1 | |
| Fe_supp_jason_reseq | 0.243 | -0.158 |
| low_pH_jason_reseq | -1.64 | -0.681 |
| NO_jason_reseq | -0.221 | -0.137 |
| B6_jason_reseq | -0.73 | -2.577 |
| MHCII_jason_reseq | -1.472 | -2.917 |
| Isoniazid02 | 0.701 | -0.441 |
| Rifampicin4 | 0.412 | -0.758 |
| Ethambutol3 | 0.185 | 0.265 |
| Meropenem3 | 0.347 | 0.539 |
| Vancomycin16 | 1.101 | 0.098 |
| Rv2680_day32 | -1.493 | -3.186 |
| H37Rv_KO_MarP | 1.541 | 1.198 |
| hypoxia_3wks | -0.355 | -0.439 |
| hypoxia_6wks | -0.541 | -0.052 |
| glycerol | 0.625 | 0.015 |
| cholesterol | -1.896 | -0.207 |
| AJ | -3.597 | -5.849 |
| Bibs02 | -3.315 | -6.0 |
| Bibs02c | -2.126 | -5.218 |
| BL6 | -1.717 | -2.18 |
| BL6a | -2.309 | -4.305 |
| BXD01 | -1.554 | -3.18 |
| BXD010 | -0.769 | -2.232 |
| BXD011 | -2.132 | -2.846 |
| BXD03 | -0.854 | -2.565 |
| BXD04 | -2.305 | -1.792 |
| BXD05 | -2.374 | -3.285 |
| BXD06 | -1.789 | -3.16 |
| BXD07 | -2.258 | -3.123 |
| BXD08 | -2.011 | -3.282 |
| BXD09 | -1.638 | -3.543 |
| CAST | -2.564 | -4.96 |
| CCcont | -1.823 | -0.15 |
| DS01 | -3.242 | -3.826 |
| DS02 | 0.252 | -4.684 |
| DS04 | -3.247 | -3.187 |
| DS0c | -1.076 | -4.084 |
| GP01 | -2.284 | -2.963 |
| GP02 | -1.322 | -2.747 |
| GP0c | -0.442 | -0.702 |
| NOD | -0.63 | -2.146 |
| NZO | -1.893 | -4.82 |
| PWK | -3.118 | -5.363 |
| H37Rv_KO_CtpC | -3.516 | -1.31 |
| H37Rv_KO_CtpD | -2.742 | -1.751 |
| H37Rv_KO_Rv1272 | -1.762 | -3.306 |
| H37Rv_KO_SugABC | 1.507 | -0.318 |
| H37Rv_KO_MbtN | -1.521 | 0.692 |
| Trans05 | -1.794 | -2.028 |
| macrophage_unactivated | -0.413 | -0.893 |
| IL1 | -1.421 | -0.344 |
| Rapamycin | -2.701 | -0.301 |
| Tcell | -2.17 | -2.017 |
| GMCSF | -1.384 | 0.325 |
| IFNab | 0.094 | 1.735 |
| IFNg | -0.738 | -1.748 |
| IFNg_GMCSF1 | 0.0 | -1.386 |
| Rv1432_day32 | -2.647 | -2.744 |
| Rv1565c_day32 | -1.316 | -3.434 |
| secA2_input | 2.069 | -0.357 |
| delta_Rv3594 | -1.159 | -0.121 |
| delta_Rv3717 | 0.203 | -0.067 |
| delta_Rv3811 | -1.374 | -0.074 |
| delta_Rv0954 | -0.04 | -0.023 |
| PonA1 | 0.154 | -0.279 |
| EccD1_KO | -0.536 | -0.217 |
| EspI_KO | 0.054 | -0.89 |
| PE35_KO | 0.166 | -0.633 |
| PPE68_KO | 0.298 | -0.448 |
| glycerol2 | -0.914 | 0.754 |
| lignocerate | 0.078 | 0.869 |
| oleate | 0.045 | 0.679 |
| phosphatidylcholine | 0.0 | 0.343 |
| acetate | 0.209 | -0.126 |
| glucAc | -0.258 | 0.187 |
| Rv0950ko | 0.633 | 0.416 |
| Rv1096ko | 1.559 | -0.431 |
| Rv3684ko | 0.609 | -0.576 |
| delta_otsA_trehalose | 0.984 | -1.389 |