Top 10 genes with highest correlation to Rv3563/fadE32:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3551/- | (cc=0.7092) | info on Rv3551/- |
| Rv3535c/hsaG | (cc=0.6806) | info on Rv3535c/hsaG |
| Rv3544c/fadE28 | (cc=0.6688) | info on Rv3544c/fadE28 |
| Rv3869/eccB1 | (cc=0.6632) | info on Rv3869/eccB1 |
| Rv3502c/- | (cc=0.6566) | info on Rv3502c/- |
| Rv3882c/eccE1 | (cc=0.6496) | info on Rv3882c/eccE1 |
| Rv0485/- | (cc=0.6463) | info on Rv0485/- |
| Rv3870/eccCa1 | (cc=0.6457) | info on Rv3870/eccCa1 |
| Rv3400/- | (cc=0.639) | info on Rv3400/- |
| Rv3871/eccCb1 | (cc=0.6221) | info on Rv3871/eccCb1 |
Correlation of Rv3563/fadE32 with Rv3544c/fadE28
Normalized LFCs for Rv3563/fadE32:
(description and provenance of datasets)
| Rv3563/fadE32 | Rv3544c/fadE28 | |
| Fe_supp_jason_reseq | 0.243 | -0.39 |
| low_pH_jason_reseq | -1.64 | -0.234 |
| NO_jason_reseq | -0.221 | 0.205 |
| B6_jason_reseq | -0.73 | -2.959 |
| MHCII_jason_reseq | -1.472 | -2.606 |
| Isoniazid02 | 0.701 | 0.044 |
| Rifampicin4 | 0.412 | 0.495 |
| Ethambutol3 | 0.185 | -0.036 |
| Meropenem3 | 0.347 | -0.359 |
| Vancomycin16 | 1.101 | 0.692 |
| Rv2680_day32 | -1.493 | -0.725 |
| H37Rv_KO_MarP | 1.541 | 0.442 |
| hypoxia_3wks | -0.355 | 0.475 |
| hypoxia_6wks | -0.541 | 0.267 |
| glycerol | 0.625 | 1.202 |
| cholesterol | -1.896 | -3.408 |
| AJ | -3.597 | -5.459 |
| Bibs02 | -3.315 | -4.302 |
| Bibs02c | -2.126 | -3.895 |
| BL6 | -1.717 | -2.705 |
| BL6a | -2.309 | -3.821 |
| BXD01 | -1.554 | -1.93 |
| BXD010 | -0.769 | -1.787 |
| BXD011 | -2.132 | -2.143 |
| BXD03 | -0.854 | -2.202 |
| BXD04 | -2.305 | -1.184 |
| BXD05 | -2.374 | -1.621 |
| BXD06 | -1.789 | -2.774 |
| BXD07 | -2.258 | -0.872 |
| BXD08 | -2.011 | -1.388 |
| BXD09 | -1.638 | -2.616 |
| CAST | -2.564 | -5.189 |
| CCcont | -1.823 | 0.243 |
| DS01 | -3.242 | -5.557 |
| DS02 | 0.252 | -5.117 |
| DS04 | -3.247 | -3.373 |
| DS0c | -1.076 | -4.69 |
| GP01 | -2.284 | -1.976 |
| GP02 | -1.322 | -1.665 |
| GP0c | -0.442 | -0.2 |
| NOD | -0.63 | -4.182 |
| NZO | -1.893 | -4.693 |
| PWK | -3.118 | -4.615 |
| H37Rv_KO_CtpC | -3.516 | -2.824 |
| H37Rv_KO_CtpD | -2.742 | -2.131 |
| H37Rv_KO_Rv1272 | -1.762 | -2.028 |
| H37Rv_KO_SugABC | 1.507 | 0.929 |
| H37Rv_KO_MbtN | -1.521 | 0.27 |
| Trans05 | -1.794 | -2.128 |
| macrophage_unactivated | -0.413 | -0.735 |
| IL1 | -1.421 | 0.0 |
| Rapamycin | -2.701 | 0.957 |
| Tcell | -2.17 | -3.314 |
| GMCSF | -1.384 | -0.18 |
| IFNab | 0.094 | 2.576 |
| IFNg | -0.738 | -0.323 |
| IFNg_GMCSF1 | 0.0 | -0.795 |
| Rv1432_day32 | -2.647 | -4.12 |
| Rv1565c_day32 | -1.316 | -2.426 |
| secA2_input | 2.069 | 1.204 |
| delta_Rv3594 | -1.159 | 1.358 |
| delta_Rv3717 | 0.203 | 0.964 |
| delta_Rv3811 | -1.374 | 1.451 |
| delta_Rv0954 | -0.04 | 1.18 |
| PonA1 | 0.154 | 2.063 |
| EccD1_KO | -0.536 | -0.852 |
| EspI_KO | 0.054 | -0.057 |
| PE35_KO | 0.166 | 0.642 |
| PPE68_KO | 0.298 | -0.128 |
| glycerol2 | -0.914 | 0.514 |
| lignocerate | 0.078 | -0.246 |
| oleate | 0.045 | 0.335 |
| phosphatidylcholine | 0.0 | -0.038 |
| acetate | 0.209 | -0.758 |
| glucAc | -0.258 | -0.612 |
| Rv0950ko | 0.633 | 0.874 |
| Rv1096ko | 1.559 | 0.458 |
| Rv3684ko | 0.609 | 0.691 |
| delta_otsA_trehalose | 0.984 | 0.993 |