Top 10 genes with highest correlation to Rv3563/fadE32:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3551/- | (cc=0.7092) | info on Rv3551/- |
| Rv3535c/hsaG | (cc=0.6806) | info on Rv3535c/hsaG |
| Rv3544c/fadE28 | (cc=0.6688) | info on Rv3544c/fadE28 |
| Rv3869/eccB1 | (cc=0.6632) | info on Rv3869/eccB1 |
| Rv3502c/- | (cc=0.6566) | info on Rv3502c/- |
| Rv3882c/eccE1 | (cc=0.6496) | info on Rv3882c/eccE1 |
| Rv0485/- | (cc=0.6463) | info on Rv0485/- |
| Rv3870/eccCa1 | (cc=0.6457) | info on Rv3870/eccCa1 |
| Rv3400/- | (cc=0.639) | info on Rv3400/- |
| Rv3871/eccCb1 | (cc=0.6221) | info on Rv3871/eccCb1 |
Correlation of Rv3563/fadE32 with Rv3400/-
Normalized LFCs for Rv3563/fadE32:
(description and provenance of datasets)
| Rv3563/fadE32 | Rv3400/- | |
| Fe_supp_jason_reseq | 0.243 | -0.671 |
| low_pH_jason_reseq | -1.64 | -1.36 |
| NO_jason_reseq | -0.221 | -1.339 |
| B6_jason_reseq | -0.73 | -2.938 |
| MHCII_jason_reseq | -1.472 | -2.903 |
| Isoniazid02 | 0.701 | -1.478 |
| Rifampicin4 | 0.412 | -0.36 |
| Ethambutol3 | 0.185 | 0.038 |
| Meropenem3 | 0.347 | -0.636 |
| Vancomycin16 | 1.101 | -1.409 |
| Rv2680_day32 | -1.493 | -1.829 |
| H37Rv_KO_MarP | 1.541 | -0.254 |
| hypoxia_3wks | -0.355 | -1.049 |
| hypoxia_6wks | -0.541 | -2.021 |
| glycerol | 0.625 | -1.706 |
| cholesterol | -1.896 | -0.947 |
| AJ | -3.597 | -5.607 |
| Bibs02 | -3.315 | -3.776 |
| Bibs02c | -2.126 | -3.052 |
| BL6 | -1.717 | -1.878 |
| BL6a | -2.309 | -2.583 |
| BXD01 | -1.554 | -2.014 |
| BXD010 | -0.769 | -0.889 |
| BXD011 | -2.132 | -1.301 |
| BXD03 | -0.854 | -1.309 |
| BXD04 | -2.305 | -1.613 |
| BXD05 | -2.374 | -2.35 |
| BXD06 | -1.789 | -0.873 |
| BXD07 | -2.258 | -1.806 |
| BXD08 | -2.011 | -2.251 |
| BXD09 | -1.638 | -2.173 |
| CAST | -2.564 | -3.36 |
| CCcont | -1.823 | 0.382 |
| DS01 | -3.242 | -4.878 |
| DS02 | 0.252 | -2.409 |
| DS04 | -3.247 | -1.731 |
| DS0c | -1.076 | -4.04 |
| GP01 | -2.284 | -2.386 |
| GP02 | -1.322 | -2.011 |
| GP0c | -0.442 | -1.365 |
| NOD | -0.63 | 0.462 |
| NZO | -1.893 | -4.82 |
| PWK | -3.118 | -4.367 |
| H37Rv_KO_CtpC | -3.516 | -2.928 |
| H37Rv_KO_CtpD | -2.742 | -1.607 |
| H37Rv_KO_Rv1272 | -1.762 | -1.48 |
| H37Rv_KO_SugABC | 1.507 | -1.158 |
| H37Rv_KO_MbtN | -1.521 | -0.491 |
| Trans05 | -1.794 | -1.408 |
| macrophage_unactivated | -0.413 | -1.054 |
| IL1 | -1.421 | -0.466 |
| Rapamycin | -2.701 | -1.36 |
| Tcell | -2.17 | -1.831 |
| GMCSF | -1.384 | -0.444 |
| IFNab | 0.094 | 0.0 |
| IFNg | -0.738 | -0.393 |
| IFNg_GMCSF1 | 0.0 | -0.729 |
| Rv1432_day32 | -2.647 | -2.511 |
| Rv1565c_day32 | -1.316 | -3.45 |
| secA2_input | 2.069 | 0.125 |
| delta_Rv3594 | -1.159 | -0.35 |
| delta_Rv3717 | 0.203 | -1.519 |
| delta_Rv3811 | -1.374 | -0.388 |
| delta_Rv0954 | -0.04 | -0.698 |
| PonA1 | 0.154 | -1.468 |
| EccD1_KO | -0.536 | 0.648 |
| EspI_KO | 0.054 | 0.322 |
| PE35_KO | 0.166 | 0.362 |
| PPE68_KO | 0.298 | 0.758 |
| glycerol2 | -0.914 | 0.245 |
| lignocerate | 0.078 | -0.377 |
| oleate | 0.045 | 1.483 |
| phosphatidylcholine | 0.0 | 0.515 |
| acetate | 0.209 | -1.051 |
| glucAc | -0.258 | -1.415 |
| Rv0950ko | 0.633 | -0.027 |
| Rv1096ko | 1.559 | 1.719 |
| Rv3684ko | 0.609 | 1.107 |
| delta_otsA_trehalose | 0.984 | -0.012 |