Top 10 genes with highest correlation to Rv3563/fadE32:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3551/- | (cc=0.7092) | info on Rv3551/- |
| Rv3535c/hsaG | (cc=0.6806) | info on Rv3535c/hsaG |
| Rv3544c/fadE28 | (cc=0.6688) | info on Rv3544c/fadE28 |
| Rv3869/eccB1 | (cc=0.6632) | info on Rv3869/eccB1 |
| Rv3502c/- | (cc=0.6566) | info on Rv3502c/- |
| Rv3882c/eccE1 | (cc=0.6496) | info on Rv3882c/eccE1 |
| Rv0485/- | (cc=0.6463) | info on Rv0485/- |
| Rv3870/eccCa1 | (cc=0.6457) | info on Rv3870/eccCa1 |
| Rv3400/- | (cc=0.639) | info on Rv3400/- |
| Rv3871/eccCb1 | (cc=0.6221) | info on Rv3871/eccCb1 |
Correlation of Rv3563/fadE32 with Rv3551/-
Normalized LFCs for Rv3563/fadE32:
(description and provenance of datasets)
| Rv3563/fadE32 | Rv3551/- | |
| Fe_supp_jason_reseq | 0.243 | 0.737 |
| low_pH_jason_reseq | -1.64 | -0.647 |
| NO_jason_reseq | -0.221 | -0.601 |
| B6_jason_reseq | -0.73 | -1.96 |
| MHCII_jason_reseq | -1.472 | -1.726 |
| Isoniazid02 | 0.701 | -0.842 |
| Rifampicin4 | 0.412 | -0.165 |
| Ethambutol3 | 0.185 | -1.515 |
| Meropenem3 | 0.347 | 0.734 |
| Vancomycin16 | 1.101 | -1.008 |
| Rv2680_day32 | -1.493 | -1.788 |
| H37Rv_KO_MarP | 1.541 | 0.246 |
| hypoxia_3wks | -0.355 | 0.08 |
| hypoxia_6wks | -0.541 | -0.693 |
| glycerol | 0.625 | 1.148 |
| cholesterol | -1.896 | -3.657 |
| AJ | -3.597 | -5.857 |
| Bibs02 | -3.315 | -4.616 |
| Bibs02c | -2.126 | -5.282 |
| BL6 | -1.717 | -2.92 |
| BL6a | -2.309 | -5.001 |
| BXD01 | -1.554 | -3.288 |
| BXD010 | -0.769 | -2.306 |
| BXD011 | -2.132 | -2.59 |
| BXD03 | -0.854 | -3.28 |
| BXD04 | -2.305 | -2.999 |
| BXD05 | -2.374 | -3.029 |
| BXD06 | -1.789 | -3.37 |
| BXD07 | -2.258 | -3.496 |
| BXD08 | -2.011 | -3.226 |
| BXD09 | -1.638 | -3.408 |
| CAST | -2.564 | -4.838 |
| CCcont | -1.823 | -0.733 |
| DS01 | -3.242 | -5.963 |
| DS02 | 0.252 | -5.49 |
| DS04 | -3.247 | -4.367 |
| DS0c | -1.076 | -5.476 |
| GP01 | -2.284 | -2.304 |
| GP02 | -1.322 | -1.942 |
| GP0c | -0.442 | -1.016 |
| NOD | -0.63 | -1.847 |
| NZO | -1.893 | -4.838 |
| PWK | -3.118 | -4.757 |
| H37Rv_KO_CtpC | -3.516 | -3.94 |
| H37Rv_KO_CtpD | -2.742 | -2.576 |
| H37Rv_KO_Rv1272 | -1.762 | -3.56 |
| H37Rv_KO_SugABC | 1.507 | -1.783 |
| H37Rv_KO_MbtN | -1.521 | -1.855 |
| Trans05 | -1.794 | -3.299 |
| macrophage_unactivated | -0.413 | 0.66 |
| IL1 | -1.421 | -1.605 |
| Rapamycin | -2.701 | -1.093 |
| Tcell | -2.17 | -2.209 |
| GMCSF | -1.384 | 0.752 |
| IFNab | 0.094 | 2.283 |
| IFNg | -0.738 | -0.249 |
| IFNg_GMCSF1 | 0.0 | -0.606 |
| Rv1432_day32 | -2.647 | -3.863 |
| Rv1565c_day32 | -1.316 | -3.884 |
| secA2_input | 2.069 | -0.54 |
| delta_Rv3594 | -1.159 | -0.26 |
| delta_Rv3717 | 0.203 | 0.191 |
| delta_Rv3811 | -1.374 | 0.556 |
| delta_Rv0954 | -0.04 | 1.149 |
| PonA1 | 0.154 | 0.384 |
| EccD1_KO | -0.536 | 1.246 |
| EspI_KO | 0.054 | 0.539 |
| PE35_KO | 0.166 | 1.105 |
| PPE68_KO | 0.298 | 1.139 |
| glycerol2 | -0.914 | 0.289 |
| lignocerate | 0.078 | 0.785 |
| oleate | 0.045 | -0.537 |
| phosphatidylcholine | 0.0 | -0.106 |
| acetate | 0.209 | 2.234 |
| glucAc | -0.258 | 1.052 |
| Rv0950ko | 0.633 | 1.903 |
| Rv1096ko | 1.559 | 0.329 |
| Rv3684ko | 0.609 | 0.092 |
| delta_otsA_trehalose | 0.984 | 0.325 |