Top 10 genes with highest correlation to Rv3560c/fadE30:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3564/fadE33 | (cc=0.6699) | info on Rv3564/fadE33 |
| Rv3549c/- | (cc=0.6632) | info on Rv3549c/- |
| Rv3502c/- | (cc=0.6579) | info on Rv3502c/- |
| Rv0199/- | (cc=0.6424) | info on Rv0199/- |
| Rv3542c/- | (cc=0.6417) | info on Rv3542c/- |
| Rv3543c/fadE29 | (cc=0.6342) | info on Rv3543c/fadE29 |
| Rv0390/- | (cc=0.6) | info on Rv0390/- |
| Rv0655/mkl | (cc=0.5874) | info on Rv0655/mkl |
| Rv3569c/hsaD | (cc=0.577) | info on Rv3569c/hsaD |
| Rv3563/fadE32 | (cc=0.5738) | info on Rv3563/fadE32 |
Correlation of Rv3560c/fadE30 with Rv3569c/hsaD
Normalized LFCs for Rv3560c/fadE30:
(description and provenance of datasets)
| Rv3560c/fadE30 | Rv3569c/hsaD | |
| Fe_supp_jason_reseq | 0.096 | -0.477 |
| low_pH_jason_reseq | -0.751 | 1.357 |
| NO_jason_reseq | 0.097 | -0.62 |
| B6_jason_reseq | -2.522 | -2.249 |
| MHCII_jason_reseq | -2.793 | -1.981 |
| Isoniazid02 | -0.249 | -1.455 |
| Rifampicin4 | -0.596 | 0.393 |
| Ethambutol3 | -0.67 | 0.066 |
| Meropenem3 | 0.28 | -1.166 |
| Vancomycin16 | -0.427 | -0.47 |
| Rv2680_day32 | -1.864 | -1.711 |
| H37Rv_KO_MarP | -0.103 | -0.326 |
| hypoxia_3wks | 0.801 | 0.873 |
| hypoxia_6wks | -0.125 | 0.572 |
| glycerol | 0.682 | 0.0 |
| cholesterol | -3.559 | -2.687 |
| AJ | -3.037 | -3.667 |
| Bibs02 | -4.145 | -3.209 |
| Bibs02c | -4.568 | -1.791 |
| BL6 | -1.436 | -1.414 |
| BL6a | -3.769 | -2.576 |
| BXD01 | -1.065 | -1.694 |
| BXD010 | 0.442 | -1.925 |
| BXD011 | -1.353 | -1.254 |
| BXD03 | -0.495 | -1.678 |
| BXD04 | 0.184 | -0.535 |
| BXD05 | -1.762 | -2.023 |
| BXD06 | -2.059 | -1.911 |
| BXD07 | -1.103 | -1.078 |
| BXD08 | -0.732 | -1.139 |
| BXD09 | -1.004 | -1.664 |
| CAST | -3.454 | -3.64 |
| CCcont | 0.156 | 0.078 |
| DS01 | -2.642 | -3.222 |
| DS02 | 1.672 | -2.347 |
| DS04 | -3.466 | -1.304 |
| DS0c | -2.303 | -2.135 |
| GP01 | -1.364 | -1.484 |
| GP02 | -1.533 | -1.544 |
| GP0c | -0.165 | -0.494 |
| NOD | 0.109 | -3.739 |
| NZO | -1.133 | -3.32 |
| PWK | -3.615 | -2.948 |
| H37Rv_KO_CtpC | -2.37 | -2.704 |
| H37Rv_KO_CtpD | -1.381 | -1.813 |
| H37Rv_KO_Rv1272 | 0.583 | 0.878 |
| H37Rv_KO_SugABC | 0.869 | 1.137 |
| H37Rv_KO_MbtN | -1.504 | -0.842 |
| Trans05 | -0.305 | 0.381 |
| macrophage_unactivated | 1.067 | -1.531 |
| IL1 | -0.394 | 1.127 |
| Rapamycin | 0.417 | 0.832 |
| Tcell | -2.281 | -3.183 |
| GMCSF | 1.613 | 0.613 |
| IFNab | 1.418 | 0.0 |
| IFNg | -0.174 | 0.406 |
| IFNg_GMCSF1 | 0.902 | 0.478 |
| Rv1432_day32 | -2.095 | -3.52 |
| Rv1565c_day32 | -2.458 | -2.257 |
| secA2_input | -0.806 | 2.151 |
| delta_Rv3594 | -1.291 | -0.327 |
| delta_Rv3717 | -1.19 | -0.031 |
| delta_Rv3811 | -1.112 | -0.153 |
| delta_Rv0954 | -1.31 | 0.269 |
| PonA1 | -0.724 | 0.313 |
| EccD1_KO | 0.934 | -1.658 |
| EspI_KO | 0.756 | -0.351 |
| PE35_KO | 0.659 | 0.201 |
| PPE68_KO | 0.0 | 0.0 |
| glycerol2 | -1.899 | -0.581 |
| lignocerate | -2.255 | -0.569 |
| oleate | -1.575 | -0.384 |
| phosphatidylcholine | -1.774 | -0.511 |
| acetate | -2.671 | -0.451 |
| glucAc | -1.687 | -0.624 |
| Rv0950ko | -0.648 | 0.232 |
| Rv1096ko | 1.034 | 0.305 |
| Rv3684ko | 0.645 | 0.413 |
| delta_otsA_trehalose | 0.124 | -0.965 |