Top 10 genes with highest correlation to Rv3560c/fadE30:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3564/fadE33 | (cc=0.6699) | info on Rv3564/fadE33 |
| Rv3549c/- | (cc=0.6632) | info on Rv3549c/- |
| Rv3502c/- | (cc=0.6579) | info on Rv3502c/- |
| Rv0199/- | (cc=0.6424) | info on Rv0199/- |
| Rv3542c/- | (cc=0.6417) | info on Rv3542c/- |
| Rv3543c/fadE29 | (cc=0.6342) | info on Rv3543c/fadE29 |
| Rv0390/- | (cc=0.6) | info on Rv0390/- |
| Rv0655/mkl | (cc=0.5874) | info on Rv0655/mkl |
| Rv3569c/hsaD | (cc=0.577) | info on Rv3569c/hsaD |
| Rv3563/fadE32 | (cc=0.5738) | info on Rv3563/fadE32 |
Correlation of Rv3560c/fadE30 with Rv0390/-
Normalized LFCs for Rv3560c/fadE30:
(description and provenance of datasets)
| Rv3560c/fadE30 | Rv0390/- | |
| Fe_supp_jason_reseq | 0.096 | 0.077 |
| low_pH_jason_reseq | -0.751 | -0.768 |
| NO_jason_reseq | 0.097 | -0.662 |
| B6_jason_reseq | -2.522 | -2.729 |
| MHCII_jason_reseq | -2.793 | -2.878 |
| Isoniazid02 | -0.249 | 0.322 |
| Rifampicin4 | -0.596 | -0.279 |
| Ethambutol3 | -0.67 | 0.703 |
| Meropenem3 | 0.28 | -0.649 |
| Vancomycin16 | -0.427 | 0.432 |
| Rv2680_day32 | -1.864 | -3.135 |
| H37Rv_KO_MarP | -0.103 | 1.009 |
| hypoxia_3wks | 0.801 | -1.224 |
| hypoxia_6wks | -0.125 | -1.391 |
| glycerol | 0.682 | -2.44 |
| cholesterol | -3.559 | -4.512 |
| AJ | -3.037 | -2.726 |
| Bibs02 | -4.145 | -4.371 |
| Bibs02c | -4.568 | -4.267 |
| BL6 | -1.436 | -3.128 |
| BL6a | -3.769 | -3.462 |
| BXD01 | -1.065 | -2.432 |
| BXD010 | 0.442 | -1.157 |
| BXD011 | -1.353 | -2.191 |
| BXD03 | -0.495 | -1.273 |
| BXD04 | 0.184 | -1.798 |
| BXD05 | -1.762 | -2.39 |
| BXD06 | -2.059 | -2.224 |
| BXD07 | -1.103 | -2.543 |
| BXD08 | -0.732 | -2.985 |
| BXD09 | -1.004 | -3.22 |
| CAST | -3.454 | -2.052 |
| CCcont | 0.156 | -1.529 |
| DS01 | -2.642 | -2.854 |
| DS02 | 1.672 | -0.501 |
| DS04 | -3.466 | -2.863 |
| DS0c | -2.303 | -2.189 |
| GP01 | -1.364 | -0.093 |
| GP02 | -1.533 | -1.324 |
| GP0c | -0.165 | 0.497 |
| NOD | 0.109 | 0.093 |
| NZO | -1.133 | -3.602 |
| PWK | -3.615 | -1.033 |
| H37Rv_KO_CtpC | -2.37 | -1.387 |
| H37Rv_KO_CtpD | -1.381 | -0.379 |
| H37Rv_KO_Rv1272 | 0.583 | -1.59 |
| H37Rv_KO_SugABC | 0.869 | 0.817 |
| H37Rv_KO_MbtN | -1.504 | -0.482 |
| Trans05 | -0.305 | -1.956 |
| macrophage_unactivated | 1.067 | -0.603 |
| IL1 | -0.394 | -0.24 |
| Rapamycin | 0.417 | -0.178 |
| Tcell | -2.281 | -0.541 |
| GMCSF | 1.613 | 0.359 |
| IFNab | 1.418 | -0.626 |
| IFNg | -0.174 | -0.037 |
| IFNg_GMCSF1 | 0.902 | -0.999 |
| Rv1432_day32 | -2.095 | 0.343 |
| Rv1565c_day32 | -2.458 | -1.69 |
| secA2_input | -0.806 | -0.64 |
| delta_Rv3594 | -1.291 | -0.187 |
| delta_Rv3717 | -1.19 | -0.223 |
| delta_Rv3811 | -1.112 | -0.714 |
| delta_Rv0954 | -1.31 | -0.477 |
| PonA1 | -0.724 | 0.338 |
| EccD1_KO | 0.934 | 0.322 |
| EspI_KO | 0.756 | 0.77 |
| PE35_KO | 0.659 | -0.423 |
| PPE68_KO | 0.0 | 0.336 |
| glycerol2 | -1.899 | 0.277 |
| lignocerate | -2.255 | -0.582 |
| oleate | -1.575 | -0.771 |
| phosphatidylcholine | -1.774 | -0.431 |
| acetate | -2.671 | -1.019 |
| glucAc | -1.687 | -2.146 |
| Rv0950ko | -0.648 | 0.805 |
| Rv1096ko | 1.034 | 0.929 |
| Rv3684ko | 0.645 | 0.829 |
| delta_otsA_trehalose | 0.124 | 0.057 |