Top 10 genes with highest correlation to Rv3560c/fadE30:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3564/fadE33 | (cc=0.6699) | info on Rv3564/fadE33 |
| Rv3549c/- | (cc=0.6632) | info on Rv3549c/- |
| Rv3502c/- | (cc=0.6579) | info on Rv3502c/- |
| Rv0199/- | (cc=0.6424) | info on Rv0199/- |
| Rv3542c/- | (cc=0.6417) | info on Rv3542c/- |
| Rv3543c/fadE29 | (cc=0.6342) | info on Rv3543c/fadE29 |
| Rv0390/- | (cc=0.6) | info on Rv0390/- |
| Rv0655/mkl | (cc=0.5874) | info on Rv0655/mkl |
| Rv3569c/hsaD | (cc=0.577) | info on Rv3569c/hsaD |
| Rv3563/fadE32 | (cc=0.5738) | info on Rv3563/fadE32 |
Correlation of Rv3560c/fadE30 with Rv0199/-
Normalized LFCs for Rv3560c/fadE30:
(description and provenance of datasets)
| Rv3560c/fadE30 | Rv0199/- | |
| Fe_supp_jason_reseq | 0.096 | 0.841 |
| low_pH_jason_reseq | -0.751 | 0.723 |
| NO_jason_reseq | 0.097 | 1.762 |
| B6_jason_reseq | -2.522 | -1.774 |
| MHCII_jason_reseq | -2.793 | -2.46 |
| Isoniazid02 | -0.249 | -0.226 |
| Rifampicin4 | -0.596 | 1.449 |
| Ethambutol3 | -0.67 | -0.641 |
| Meropenem3 | 0.28 | 1.031 |
| Vancomycin16 | -0.427 | 1.828 |
| Rv2680_day32 | -1.864 | -3.021 |
| H37Rv_KO_MarP | -0.103 | 1.243 |
| hypoxia_3wks | 0.801 | 2.528 |
| hypoxia_6wks | -0.125 | 2.99 |
| glycerol | 0.682 | -0.607 |
| cholesterol | -3.559 | -1.345 |
| AJ | -3.037 | -4.548 |
| Bibs02 | -4.145 | -4.036 |
| Bibs02c | -4.568 | -5.106 |
| BL6 | -1.436 | -0.391 |
| BL6a | -3.769 | -2.937 |
| BXD01 | -1.065 | -1.034 |
| BXD010 | 0.442 | -0.765 |
| BXD011 | -1.353 | -0.234 |
| BXD03 | -0.495 | -0.87 |
| BXD04 | 0.184 | -1.369 |
| BXD05 | -1.762 | -0.804 |
| BXD06 | -2.059 | -0.88 |
| BXD07 | -1.103 | 0.112 |
| BXD08 | -0.732 | -0.525 |
| BXD09 | -1.004 | -1.066 |
| CAST | -3.454 | -2.785 |
| CCcont | 0.156 | -0.275 |
| DS01 | -2.642 | -3.673 |
| DS02 | 1.672 | -0.832 |
| DS04 | -3.466 | -1.13 |
| DS0c | -2.303 | -2.681 |
| GP01 | -1.364 | -2.179 |
| GP02 | -1.533 | -2.107 |
| GP0c | -0.165 | -0.279 |
| NOD | 0.109 | -1.783 |
| NZO | -1.133 | -2.823 |
| PWK | -3.615 | -3.125 |
| H37Rv_KO_CtpC | -2.37 | -2.861 |
| H37Rv_KO_CtpD | -1.381 | -0.738 |
| H37Rv_KO_Rv1272 | 0.583 | 0.533 |
| H37Rv_KO_SugABC | 0.869 | 0.836 |
| H37Rv_KO_MbtN | -1.504 | -0.035 |
| Trans05 | -0.305 | -1.893 |
| macrophage_unactivated | 1.067 | -1.815 |
| IL1 | -0.394 | 2.073 |
| Rapamycin | 0.417 | 0.724 |
| Tcell | -2.281 | -1.733 |
| GMCSF | 1.613 | -0.106 |
| IFNab | 1.418 | -0.964 |
| IFNg | -0.174 | -0.446 |
| IFNg_GMCSF1 | 0.902 | -0.776 |
| Rv1432_day32 | -2.095 | -3.95 |
| Rv1565c_day32 | -2.458 | -3.657 |
| secA2_input | -0.806 | 0.255 |
| delta_Rv3594 | -1.291 | 0.015 |
| delta_Rv3717 | -1.19 | 0.327 |
| delta_Rv3811 | -1.112 | -0.348 |
| delta_Rv0954 | -1.31 | -0.363 |
| PonA1 | -0.724 | 0.679 |
| EccD1_KO | 0.934 | 0.204 |
| EspI_KO | 0.756 | 0.528 |
| PE35_KO | 0.659 | -0.566 |
| PPE68_KO | 0.0 | 0.0 |
| glycerol2 | -1.899 | -1.454 |
| lignocerate | -2.255 | -2.435 |
| oleate | -1.575 | 0.252 |
| phosphatidylcholine | -1.774 | -1.454 |
| acetate | -2.671 | -0.376 |
| glucAc | -1.687 | -0.256 |
| Rv0950ko | -0.648 | -0.368 |
| Rv1096ko | 1.034 | 0.051 |
| Rv3684ko | 0.645 | -0.773 |
| delta_otsA_trehalose | 0.124 | 0.23 |